Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.31□□□□□ -0.28
BdnfP21237 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
BdnfP21237 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.31□□□□□ -0.28
BdnfP21237 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BdnfP21237 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
BdnfP21237 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BdnfP21237 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
BdnfP21237 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BdnfP21237 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BdnfP21237 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
BdnfP21237 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
BdnfP21237 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
BdnfP21237 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
BdnfP21237 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.3□□□□□ -0.28
BdnfP21237 Gm4995-201ENSMUST00000117247 432 ntBASIC13.3□□□□□ -0.28
BdnfP21237 Gm12882-201ENSMUST00000121696 517 ntBASIC13.3□□□□□ -0.28
BdnfP21237 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.3□□□□□ -0.28
BdnfP21237 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.3□□□□□ -0.28
BdnfP21237 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.3□□□□□ -0.28
BdnfP21237 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.3□□□□□ -0.28
BdnfP21237 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
BdnfP21237 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
BdnfP21237 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.29□□□□□ -0.28
BdnfP21237 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.29□□□□□ -0.28
BdnfP21237 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.29□□□□□ -0.28
BdnfP21237 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
BdnfP21237 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.29□□□□□ -0.28
BdnfP21237 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.29□□□□□ -0.28
BdnfP21237 Gm25911-201ENSMUST00000157621 56 ntBASIC13.29□□□□□ -0.28
BdnfP21237 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.29□□□□□ -0.28
BdnfP21237 Gm8000-201ENSMUST00000188378 592 ntBASIC13.29□□□□□ -0.28
BdnfP21237 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.29□□□□□ -0.28
BdnfP21237 Gm6443-201ENSMUST00000203599 874 ntBASIC13.29□□□□□ -0.28
BdnfP21237 Gm45612-201ENSMUST00000211320 160 ntBASIC13.29□□□□□ -0.28
BdnfP21237 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.29□□□□□ -0.28
BdnfP21237 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.29□□□□□ -0.28
BdnfP21237 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.29□□□□□ -0.28
BdnfP21237 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.29□□□□□ -0.28
BdnfP21237 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.29□□□□□ -0.28
BdnfP21237 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.29□□□□□ -0.28
BdnfP21237 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
BdnfP21237 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
BdnfP21237 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
BdnfP21237 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.29□□□□□ -0.28
BdnfP21237 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
BdnfP21237 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms