Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd48P18181 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd48P18181 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd48P18181 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd48P18181 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.44□□□□□ -0.42
Cd48P18181 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd48P18181 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
Cd48P18181 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd48P18181 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.44□□□□□ -0.42
Cd48P18181 AA543401-201ENSMUST00000164248 1269 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Cd48P18181 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cd48P18181 Gm29310-201ENSMUST00000185468 696 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.44□□□□□ -0.42
Cd48P18181 Gm21825-201ENSMUST00000185728 696 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Gm29109-201ENSMUST00000185895 696 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Gm21896-201ENSMUST00000186520 696 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Gm21873-201ENSMUST00000186728 696 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Gm21794-201ENSMUST00000187056 696 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Gm21880-201ENSMUST00000187275 696 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Gm21826-201ENSMUST00000187451 696 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Gm21198-201ENSMUST00000188393 696 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Gm21749-201ENSMUST00000189343 696 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Gm21901-201ENSMUST00000189568 696 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Gm29424-201ENSMUST00000189716 696 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Gm28599-201ENSMUST00000189838 694 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Gm21867-201ENSMUST00000189917 696 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Gm29269-201ENSMUST00000190087 696 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Gm21722-201ENSMUST00000190153 696 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Gm5264-201ENSMUST00000190584 848 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Gm28423-201ENSMUST00000190701 696 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Gm21899-201ENSMUST00000190745 696 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Gm21910-201ENSMUST00000191163 696 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Gm21849-201ENSMUST00000191571 696 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Gm28678-201ENSMUST00000191593 696 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Gm20910-201ENSMUST00000193268 696 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Gm21871-201ENSMUST00000194621 696 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cd48P18181 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd48P18181 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd48P18181 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd48P18181 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd48P18181 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd48P18181 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd48P18181 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd48P18181 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd48P18181 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cd48P18181 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd48P18181 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
Cd48P18181 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd48P18181 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cd48P18181 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cd48P18181 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd48P18181 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd48P18181 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.44□□□□□ -0.42
Cd48P18181 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd48P18181 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd48P18181 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cd48P18181 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cd48P18181 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Cd48P18181 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cd48P18181 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cd48P18181 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.43□□□□□ -0.42
Cd48P18181 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.43□□□□□ -0.42
Cd48P18181 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.43□□□□□ -0.42
Cd48P18181 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.43□□□□□ -0.42
Cd48P18181 Gm44771-201ENSMUST00000206975 626 ntBASIC12.43□□□□□ -0.42
Cd48P18181 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.43□□□□□ -0.42
Cd48P18181 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.43□□□□□ -0.42
Cd48P18181 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cd48P18181 Gm10175-201ENSMUST00000086013 645 ntBASIC12.43□□□□□ -0.42
Cd48P18181 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cd48P18181 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cd48P18181 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Cd48P18181 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd48P18181 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms