Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.22□□□□□ -0.61
Cdx1P18111 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.22□□□□□ -0.61
Cdx1P18111 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.22□□□□□ -0.61
Cdx1P18111 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.22□□□□□ -0.61
Cdx1P18111 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.22□□□□□ -0.61
Cdx1P18111 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.22□□□□□ -0.61
Cdx1P18111 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.22□□□□□ -0.61
Cdx1P18111 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Cdx1P18111 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.22□□□□□ -0.61
Cdx1P18111 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cdx1P18111 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx1P18111 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx1P18111 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.21□□□□□ -0.61
Cdx1P18111 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx1P18111 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx1P18111 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx1P18111 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx1P18111 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx1P18111 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx1P18111 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Cdx1P18111 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx1P18111 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cdx1P18111 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx1P18111 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx1P18111 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx1P18111 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx1P18111 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx1P18111 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx1P18111 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC11.21□□□□□ -0.61
Cdx1P18111 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx1P18111 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.21□□□□□ -0.61
Cdx1P18111 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.61
Cdx1P18111 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx1P18111 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx1P18111 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx1P18111 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx1P18111 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx1P18111 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.21□□□□□ -0.61
Cdx1P18111 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx1P18111 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.21□□□□□ -0.61
Cdx1P18111 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.21□□□□□ -0.61
Cdx1P18111 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx1P18111 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Cdx1P18111 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdx1P18111 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.21□□□□□ -0.62
Cdx1P18111 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdx1P18111 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdx1P18111 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdx1P18111 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.21□□□□□ -0.62
Cdx1P18111 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdx1P18111 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Cdx1P18111 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdx1P18111 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.2□□□□□ -0.62
Cdx1P18111 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.2□□□□□ -0.62
Cdx1P18111 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx1P18111 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx1P18111 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx1P18111 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx1P18111 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.2□□□□□ -0.62
Cdx1P18111 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cdx1P18111 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.2□□□□□ -0.62
Cdx1P18111 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC11.2□□□□□ -0.62
Cdx1P18111 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cdx1P18111 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx1P18111 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx1P18111 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx1P18111 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx1P18111 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx1P18111 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx1P18111 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC11.2□□□□□ -0.62
Cdx1P18111 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Cdx1P18111 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.2□□□□□ -0.62
Cdx1P18111 Gm10576-201ENSMUST00000191927 825 ntBASIC11.2□□□□□ -0.62
Cdx1P18111 Gm9682-201ENSMUST00000197505 556 ntBASIC11.2□□□□□ -0.62
Cdx1P18111 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.2□□□□□ -0.62
Cdx1P18111 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Cdx1P18111 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.2□□□□□ -0.62
Cdx1P18111 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms