Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RaraP11416 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.99□□□□□ -0.01
RaraP11416 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RaraP11416 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.99□□□□□ -0.01
RaraP11416 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.98□□□□□ -0.01
RaraP11416 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.98□□□□□ -0.01
RaraP11416 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RaraP11416 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
RaraP11416 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.98□□□□□ -0.01
RaraP11416 Gm16476-201ENSMUST00000221544 139 ntBASIC14.98□□□□□ -0.01
RaraP11416 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.98□□□□□ -0.01
RaraP11416 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
RaraP11416 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Mir497b-201ENSMUST00000093601 125 ntBASIC14.98□□□□□ -0.01
RaraP11416 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
RaraP11416 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.98□□□□□ -0.01
RaraP11416 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
RaraP11416 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RaraP11416 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RaraP11416 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RaraP11416 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.97□□□□□ -0.01
RaraP11416 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RaraP11416 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RaraP11416 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
RaraP11416 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RaraP11416 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RaraP11416 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RaraP11416 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RaraP11416 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RaraP11416 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RaraP11416 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RaraP11416 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RaraP11416 Gm22065-201ENSMUST00000103753 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm22066-201ENSMUST00000103761 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm24932-201ENSMUST00000103763 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm24115-201ENSMUST00000103799 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm22190-201ENSMUST00000103827 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm22191-201ENSMUST00000103831 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm24721-201ENSMUST00000103849 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm28018-201ENSMUST00000103869 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm26399-201ENSMUST00000103937 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RaraP11416 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RaraP11416 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RaraP11416 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.97□□□□□ -0.01
RaraP11416 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RaraP11416 Gm25349-201ENSMUST00000177728 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm23616-201ENSMUST00000177797 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm25871-201ENSMUST00000177816 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm24752-201ENSMUST00000178240 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm24496-201ENSMUST00000178287 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm25649-201ENSMUST00000178476 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm25548-201ENSMUST00000178681 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm23147-201ENSMUST00000178841 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm26095-201ENSMUST00000179270 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm22171-201ENSMUST00000179283 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm23936-201ENSMUST00000179354 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm22619-201ENSMUST00000179516 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm25255-201ENSMUST00000179579 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm24755-201ENSMUST00000179691 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm26506-201ENSMUST00000179692 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm25086-201ENSMUST00000179931 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm23243-201ENSMUST00000180047 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm24659-201ENSMUST00000180212 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm24169-201ENSMUST00000180244 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm23689-201ENSMUST00000180354 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm27359-201ENSMUST00000184153 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm27785-201ENSMUST00000184268 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm27466-201ENSMUST00000184396 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm27703-201ENSMUST00000184836 110 ntBASIC14.97□□□□□ -0.01
RaraP11416 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC14.97□□□□□ -0.01
RaraP11416 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms