Protein–RNA interactions for Protein: P10078

Zfp28, Zinc finger protein 28, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp28P10078 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Zfp28P10078 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Zfp28P10078 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Zfp28P10078 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Zfp28P10078 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Zfp28P10078 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Zfp28P10078 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Zfp28P10078 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.75□□□□□ -0.37
Zfp28P10078 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Zfp28P10078 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Zfp28P10078 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.75□□□□□ -0.37
Zfp28P10078 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.75□□□□□ -0.37
Zfp28P10078 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Zfp28P10078 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Zfp28P10078 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.75□□□□□ -0.37
Zfp28P10078 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.75□□□□□ -0.37
Zfp28P10078 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Zfp28P10078 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.75□□□□□ -0.37
Zfp28P10078 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.75□□□□□ -0.37
Zfp28P10078 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.75□□□□□ -0.37
Zfp28P10078 Gm7461-201ENSMUST00000058918 827 ntBASIC12.75□□□□□ -0.37
Zfp28P10078 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Zfp28P10078 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Zfp28P10078 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Zfp28P10078 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Zfp28P10078 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Zfp28P10078 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Zfp28P10078 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Zfp28P10078 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zfp28P10078 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zfp28P10078 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zfp28P10078 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zfp28P10078 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zfp28P10078 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Zfp28P10078 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Zfp28P10078 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Zfp28P10078 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
Zfp28P10078 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Zfp28P10078 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zfp28P10078 Gm2651-201ENSMUST00000203560 838 ntBASIC12.74□□□□□ -0.37
Zfp28P10078 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Zfp28P10078 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Zfp28P10078 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zfp28P10078 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zfp28P10078 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Zfp28P10078 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zfp28P10078 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Zfp28P10078 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zfp28P10078 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zfp28P10078 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Zfp28P10078 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Zfp28P10078 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Zfp28P10078 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp28P10078 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp28P10078 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Zfp28P10078 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.73□□□□□ -0.37
Zfp28P10078 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp28P10078 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp28P10078 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Zfp28P10078 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp28P10078 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Zfp28P10078 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.73□□□□□ -0.37
Zfp28P10078 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp28P10078 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp28P10078 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp28P10078 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Zfp28P10078 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp28P10078 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Zfp28P10078 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp28P10078 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp28P10078 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.73□□□□□ -0.37
Zfp28P10078 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp28P10078 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.73□□□□□ -0.37
Zfp28P10078 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.73□□□□□ -0.37
Zfp28P10078 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp28P10078 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp28P10078 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp28P10078 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Zfp28P10078 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp28P10078 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp28P10078 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp28P10078 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.73□□□□□ -0.37
Zfp28P10078 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp28P10078 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp28P10078 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp28P10078 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp28P10078 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp28P10078 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Zfp28P10078 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp28P10078 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp28P10078 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp28P10078 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp28P10078 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Zfp28P10078 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp28P10078 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp28P10078 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp28P10078 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp28P10078 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp28P10078 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp28P10078 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms