Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa4P06798 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa4P06798 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Hoxa4P06798 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Hoxa4P06798 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.62□□□□□ -0.23
Hoxa4P06798 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa4P06798 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Hoxa4P06798 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa4P06798 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa4P06798 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Hoxa4P06798 Gm12341-201ENSMUST00000119724 503 ntBASIC13.62□□□□□ -0.23
Hoxa4P06798 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.62□□□□□ -0.23
Hoxa4P06798 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.62□□□□□ -0.23
Hoxa4P06798 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa4P06798 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa4P06798 Mir7654-201ENSMUST00000185082 70 ntBASIC13.62□□□□□ -0.23
Hoxa4P06798 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.62□□□□□ -0.23
Hoxa4P06798 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.62□□□□□ -0.23
Hoxa4P06798 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.62□□□□□ -0.23
Hoxa4P06798 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.62□□□□□ -0.23
Hoxa4P06798 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa4P06798 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa4P06798 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.62□□□□□ -0.23
Hoxa4P06798 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Hoxa4P06798 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa4P06798 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
Hoxa4P06798 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa4P06798 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa4P06798 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa4P06798 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.62□□□□□ -0.23
Hoxa4P06798 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa4P06798 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa4P06798 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa4P06798 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.62□□□□□ -0.23
Hoxa4P06798 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa4P06798 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa4P06798 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa4P06798 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa4P06798 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa4P06798 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.62□□□□□ -0.23
Hoxa4P06798 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxa4P06798 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxa4P06798 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxa4P06798 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.61□□□□□ -0.23
Hoxa4P06798 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxa4P06798 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxa4P06798 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Hoxa4P06798 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxa4P06798 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxa4P06798 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxa4P06798 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.61□□□□□ -0.23
Hoxa4P06798 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxa4P06798 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxa4P06798 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Hoxa4P06798 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Hoxa4P06798 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxa4P06798 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.61□□□□□ -0.23
Hoxa4P06798 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxa4P06798 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.61□□□□□ -0.23
Hoxa4P06798 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.61□□□□□ -0.23
Hoxa4P06798 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxa4P06798 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.61□□□□□ -0.23
Hoxa4P06798 Mir6392-201ENSMUST00000184924 108 ntBASIC13.61□□□□□ -0.23
Hoxa4P06798 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxa4P06798 Gm18018-201ENSMUST00000198273 408 ntBASIC13.61□□□□□ -0.23
Hoxa4P06798 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxa4P06798 Gm17330-201ENSMUST00000221047 165 ntBASIC13.61□□□□□ -0.23
Hoxa4P06798 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.61□□□□□ -0.23
Hoxa4P06798 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Hoxa4P06798 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxa4P06798 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Hoxa4P06798 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxa4P06798 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxa4P06798 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxa4P06798 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxa4P06798 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.61□□□□□ -0.23
Hoxa4P06798 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxa4P06798 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxa4P06798 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.61□□□□□ -0.23
Hoxa4P06798 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxa4P06798 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxa4P06798 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Hoxa4P06798 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.61□□□□□ -0.23
Hoxa4P06798 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxa4P06798 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxa4P06798 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxa4P06798 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxa4P06798 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxa4P06798 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxa4P06798 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.6□□□□□ -0.23
Hoxa4P06798 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Hoxa4P06798 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxa4P06798 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Hoxa4P06798 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.6□□□□□ -0.23
Hoxa4P06798 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.6□□□□□ -0.23
Hoxa4P06798 Gm12485-201ENSMUST00000119641 291 ntBASIC13.6□□□□□ -0.23
Hoxa4P06798 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Hoxa4P06798 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Hoxa4P06798 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Hoxa4P06798 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms