Protein–RNA interactions for Protein: P04202

Tgfb1, Transforming growth factor beta-1, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1P04202 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tgfb1P04202 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tgfb1P04202 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.82□□□□□ -0.36
Tgfb1P04202 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.82□□□□□ -0.36
Tgfb1P04202 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tgfb1P04202 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tgfb1P04202 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tgfb1P04202 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tgfb1P04202 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tgfb1P04202 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tgfb1P04202 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Tgfb1P04202 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tgfb1P04202 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Tgfb1P04202 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tgfb1P04202 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tgfb1P04202 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tgfb1P04202 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.81□□□□□ -0.36
Tgfb1P04202 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tgfb1P04202 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tgfb1P04202 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Tgfb1P04202 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tgfb1P04202 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tgfb1P04202 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tgfb1P04202 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tgfb1P04202 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tgfb1P04202 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tgfb1P04202 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tgfb1P04202 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Tgfb1P04202 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.81□□□□□ -0.36
Tgfb1P04202 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.81□□□□□ -0.36
Tgfb1P04202 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.81□□□□□ -0.36
Tgfb1P04202 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.81□□□□□ -0.36
Tgfb1P04202 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tgfb1P04202 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Tgfb1P04202 Gm43703-201ENSMUST00000200523 763 ntBASIC12.81□□□□□ -0.36
Tgfb1P04202 Gm46209-201ENSMUST00000217912 553 ntBASIC12.81□□□□□ -0.36
Tgfb1P04202 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.81□□□□□ -0.36
Tgfb1P04202 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tgfb1P04202 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Tgfb1P04202 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tgfb1P04202 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tgfb1P04202 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tgfb1P04202 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Tgfb1P04202 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tgfb1P04202 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Tgfb1P04202 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tgfb1P04202 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tgfb1P04202 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tgfb1P04202 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tgfb1P04202 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tgfb1P04202 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tgfb1P04202 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tgfb1P04202 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tgfb1P04202 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.8□□□□□ -0.36
Tgfb1P04202 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tgfb1P04202 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.8□□□□□ -0.36
Tgfb1P04202 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.8□□□□□ -0.36
Tgfb1P04202 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Tgfb1P04202 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Gm22175-201ENSMUST00000175007 78 ntBASIC12.8□□□□□ -0.36
Tgfb1P04202 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.8□□□□□ -0.36
Tgfb1P04202 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.8□□□□□ -0.36
Tgfb1P04202 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Tgfb1P04202 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.8□□□□□ -0.36
Tgfb1P04202 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.8□□□□□ -0.36
Tgfb1P04202 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.8□□□□□ -0.36
Tgfb1P04202 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Tgfb1P04202 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tgfb1P04202 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tgfb1P04202 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms