Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IghmP01872 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
IghmP01872 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IghmP01872 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IghmP01872 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.98□□□□□ -0.33
IghmP01872 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.98□□□□□ -0.33
IghmP01872 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IghmP01872 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IghmP01872 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.98□□□□□ -0.33
IghmP01872 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
IghmP01872 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
IghmP01872 Mir449b-201ENSMUST00000104833 80 ntBASIC12.98□□□□□ -0.33
IghmP01872 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.98□□□□□ -0.33
IghmP01872 Gm15460-201ENSMUST00000118147 391 ntBASIC12.98□□□□□ -0.33
IghmP01872 Mir1897-201ENSMUST00000122581 272 ntBASIC12.98□□□□□ -0.33
IghmP01872 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IghmP01872 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.98□□□□□ -0.33
IghmP01872 Gm27533-201ENSMUST00000183800 152 ntBASIC12.98□□□□□ -0.33
IghmP01872 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.98□□□□□ -0.33
IghmP01872 Gm7774-201ENSMUST00000200064 533 ntBASIC12.98□□□□□ -0.33
IghmP01872 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IghmP01872 Gm5312-201ENSMUST00000203728 547 ntBASIC12.98□□□□□ -0.33
IghmP01872 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IghmP01872 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.98□□□□□ -0.33
IghmP01872 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.98□□□□□ -0.33
IghmP01872 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.98□□□□□ -0.33
IghmP01872 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.98□□□□□ -0.33
IghmP01872 Shd-206ENSMUST00000225145 998 ntBASIC12.98□□□□□ -0.33
IghmP01872 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IghmP01872 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
IghmP01872 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
IghmP01872 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IghmP01872 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IghmP01872 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.98□□□□□ -0.33
IghmP01872 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IghmP01872 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
IghmP01872 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IghmP01872 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.98□□□□□ -0.33
IghmP01872 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.97□□□□□ -0.33
IghmP01872 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.97□□□□□ -0.33
IghmP01872 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
IghmP01872 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
IghmP01872 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
IghmP01872 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
IghmP01872 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.97□□□□□ -0.33
IghmP01872 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
IghmP01872 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.97□□□□□ -0.33
IghmP01872 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.97□□□□□ -0.33
IghmP01872 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.97□□□□□ -0.33
IghmP01872 Gm18041-201ENSMUST00000218210 618 ntBASIC12.97□□□□□ -0.33
IghmP01872 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
IghmP01872 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
IghmP01872 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
IghmP01872 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
IghmP01872 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IghmP01872 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
IghmP01872 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
IghmP01872 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
IghmP01872 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
IghmP01872 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
IghmP01872 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
IghmP01872 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
IghmP01872 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
IghmP01872 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
IghmP01872 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.96□□□□□ -0.33
IghmP01872 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.96□□□□□ -0.33
IghmP01872 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.96□□□□□ -0.33
IghmP01872 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
IghmP01872 Gm21470-201ENSMUST00000187680 696 ntBASIC12.96□□□□□ -0.33
IghmP01872 Gm2756-201ENSMUST00000195851 400 ntBASIC12.96□□□□□ -0.33
IghmP01872 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.96□□□□□ -0.33
IghmP01872 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms