Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
TcraP01849 Gm18489-201ENSMUST00000172565 551 ntBASIC10.11□□□□□ -0.79
TcraP01849 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
TcraP01849 Gm27459-201ENSMUST00000184860 107 ntBASIC10.11□□□□□ -0.79
TcraP01849 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC10.11□□□□□ -0.79
TcraP01849 Gm44357-201ENSMUST00000195897 142 ntBASIC10.11□□□□□ -0.79
TcraP01849 Gm19658-201ENSMUST00000196231 138 ntBASIC10.11□□□□□ -0.79
TcraP01849 Gm44367-201ENSMUST00000196836 138 ntBASIC10.11□□□□□ -0.79
TcraP01849 Gm44350-201ENSMUST00000197197 138 ntBASIC10.11□□□□□ -0.79
TcraP01849 Gm44390-201ENSMUST00000197533 144 ntBASIC10.11□□□□□ -0.79
TcraP01849 Gm44313-201ENSMUST00000198018 138 ntBASIC10.11□□□□□ -0.79
TcraP01849 Gm44486-201ENSMUST00000198508 138 ntBASIC10.11□□□□□ -0.79
TcraP01849 Gm44314-201ENSMUST00000199263 138 ntBASIC10.11□□□□□ -0.79
TcraP01849 Gm44394-201ENSMUST00000199558 138 ntBASIC10.11□□□□□ -0.79
TcraP01849 Gm44484-201ENSMUST00000199873 138 ntBASIC10.11□□□□□ -0.79
TcraP01849 Gm44466-201ENSMUST00000200264 138 ntBASIC10.11□□□□□ -0.79
TcraP01849 Gm44359-201ENSMUST00000200671 138 ntBASIC10.11□□□□□ -0.79
TcraP01849 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
TcraP01849 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC10.11□□□□□ -0.79
TcraP01849 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC10.11□□□□□ -0.79
TcraP01849 Birc2-201ENSMUST00000054878 378 ntBASIC10.11□□□□□ -0.79
TcraP01849 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
TcraP01849 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
TcraP01849 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
TcraP01849 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
TcraP01849 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
TcraP01849 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
TcraP01849 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
TcraP01849 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
TcraP01849 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC10.11□□□□□ -0.79
TcraP01849 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
TcraP01849 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
TcraP01849 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
TcraP01849 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
TcraP01849 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
TcraP01849 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
TcraP01849 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
TcraP01849 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
TcraP01849 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.11□□□□□ -0.79
TcraP01849 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC10.11□□□□□ -0.79
TcraP01849 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
TcraP01849 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
TcraP01849 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
TcraP01849 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.1□□□□□ -0.79
TcraP01849 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.1□□□□□ -0.79
TcraP01849 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
TcraP01849 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC10.1□□□□□ -0.79
TcraP01849 Gm25925-201ENSMUST00000158314 306 ntBASIC10.1□□□□□ -0.79
TcraP01849 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC10.1□□□□□ -0.79
TcraP01849 Gm6089-201ENSMUST00000197666 938 ntBASIC10.1□□□□□ -0.79
TcraP01849 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC10.1□□□□□ -0.79
TcraP01849 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
TcraP01849 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
TcraP01849 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
TcraP01849 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
TcraP01849 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC10.09□□□□□ -0.79
TcraP01849 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
TcraP01849 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.09□□□□□ -0.79
TcraP01849 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms