Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.31□□□□□ -0.28
Hcn1O88704 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.31□□□□□ -0.28
Hcn1O88704 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.31□□□□□ -0.28
Hcn1O88704 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.31□□□□□ -0.28
Hcn1O88704 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 Gm27618-201ENSMUST00000183671 60 ntBASIC13.31□□□□□ -0.28
Hcn1O88704 Gm10576-201ENSMUST00000191927 825 ntBASIC13.31□□□□□ -0.28
Hcn1O88704 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.31□□□□□ -0.28
Hcn1O88704 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.31□□□□□ -0.28
Hcn1O88704 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Hcn1O88704 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hcn1O88704 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.31□□□□□ -0.28
Hcn1O88704 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.31□□□□□ -0.28
Hcn1O88704 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Hcn1O88704 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.3□□□□□ -0.28
Hcn1O88704 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.3□□□□□ -0.28
Hcn1O88704 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.3□□□□□ -0.28
Hcn1O88704 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.3□□□□□ -0.28
Hcn1O88704 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.3□□□□□ -0.28
Hcn1O88704 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.3□□□□□ -0.28
Hcn1O88704 Gm9719-201ENSMUST00000162765 543 ntBASIC13.3□□□□□ -0.28
Hcn1O88704 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.3□□□□□ -0.28
Hcn1O88704 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.3□□□□□ -0.28
Hcn1O88704 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.3□□□□□ -0.28
Hcn1O88704 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.3□□□□□ -0.28
Hcn1O88704 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Hcn1O88704 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hcn1O88704 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.3□□□□□ -0.28
Hcn1O88704 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.29□□□□□ -0.28
Hcn1O88704 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Hcn1O88704 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.29□□□□□ -0.28
Hcn1O88704 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.29□□□□□ -0.28
Hcn1O88704 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Gm5566-201ENSMUST00000116118 459 ntBASIC13.29□□□□□ -0.28
Hcn1O88704 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.29□□□□□ -0.28
Hcn1O88704 Gm6222-201ENSMUST00000120787 396 ntBASIC13.29□□□□□ -0.28
Hcn1O88704 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.29□□□□□ -0.28
Hcn1O88704 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Gm25144-201ENSMUST00000179561 110 ntBASIC13.29□□□□□ -0.28
Hcn1O88704 Gm25352-201ENSMUST00000179815 110 ntBASIC13.29□□□□□ -0.28
Hcn1O88704 Gm27622-201ENSMUST00000183779 60 ntBASIC13.29□□□□□ -0.28
Hcn1O88704 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.29□□□□□ -0.28
Hcn1O88704 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms