Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.69□□□□□ -0.22
Pdlim1O70400 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pdlim1O70400 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.69□□□□□ -0.22
Pdlim1O70400 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.69□□□□□ -0.22
Pdlim1O70400 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.69□□□□□ -0.22
Pdlim1O70400 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.69□□□□□ -0.22
Pdlim1O70400 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.69□□□□□ -0.22
Pdlim1O70400 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.69□□□□□ -0.22
Pdlim1O70400 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.69□□□□□ -0.22
Pdlim1O70400 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pdlim1O70400 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.69□□□□□ -0.22
Pdlim1O70400 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Pdlim1O70400 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.69□□□□□ -0.22
Pdlim1O70400 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.69□□□□□ -0.22
Pdlim1O70400 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pdlim1O70400 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pdlim1O70400 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.69□□□□□ -0.22
Pdlim1O70400 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.69□□□□□ -0.22
Pdlim1O70400 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim1O70400 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim1O70400 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pdlim1O70400 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Pdlim1O70400 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim1O70400 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim1O70400 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim1O70400 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim1O70400 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.68□□□□□ -0.22
Pdlim1O70400 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
Pdlim1O70400 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pdlim1O70400 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim1O70400 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pdlim1O70400 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pdlim1O70400 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim1O70400 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
Pdlim1O70400 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim1O70400 Gm28760-201ENSMUST00000185995 736 ntBASIC13.68□□□□□ -0.22
Pdlim1O70400 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.68□□□□□ -0.22
Pdlim1O70400 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim1O70400 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim1O70400 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.68□□□□□ -0.22
Pdlim1O70400 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.68□□□□□ -0.22
Pdlim1O70400 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim1O70400 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim1O70400 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Pdlim1O70400 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.68□□□□□ -0.22
Pdlim1O70400 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pdlim1O70400 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.68□□□□□ -0.22
Pdlim1O70400 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.68□□□□□ -0.22
Pdlim1O70400 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim1O70400 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim1O70400 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdlim1O70400 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim1O70400 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim1O70400 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim1O70400 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim1O70400 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim1O70400 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim1O70400 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pdlim1O70400 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pdlim1O70400 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pdlim1O70400 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
Pdlim1O70400 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Pdlim1O70400 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim1O70400 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pdlim1O70400 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pdlim1O70400 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.67□□□□□ -0.22
Pdlim1O70400 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.67□□□□□ -0.22
Pdlim1O70400 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim1O70400 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim1O70400 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim1O70400 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim1O70400 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim1O70400 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim1O70400 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdlim1O70400 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms