Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ChkaO54804 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ChkaO54804 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ChkaO54804 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ChkaO54804 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ChkaO54804 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
ChkaO54804 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ChkaO54804 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.02□□□□□ -0.16
ChkaO54804 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ChkaO54804 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ChkaO54804 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ChkaO54804 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ChkaO54804 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ChkaO54804 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ChkaO54804 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.02□□□□□ -0.17
ChkaO54804 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ChkaO54804 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ChkaO54804 Gm6916-202ENSMUST00000205523 195 ntBASIC14.02□□□□□ -0.17
ChkaO54804 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
ChkaO54804 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.02□□□□□ -0.17
ChkaO54804 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.02□□□□□ -0.17
ChkaO54804 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ChkaO54804 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ChkaO54804 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
ChkaO54804 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ChkaO54804 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
ChkaO54804 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ChkaO54804 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ChkaO54804 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ChkaO54804 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
ChkaO54804 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ChkaO54804 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ChkaO54804 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ChkaO54804 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ChkaO54804 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ChkaO54804 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ChkaO54804 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ChkaO54804 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ChkaO54804 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ChkaO54804 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ChkaO54804 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ChkaO54804 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ChkaO54804 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.01□□□□□ -0.17
ChkaO54804 Gm16476-201ENSMUST00000221544 139 ntBASIC14.01□□□□□ -0.17
ChkaO54804 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ChkaO54804 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ChkaO54804 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ChkaO54804 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ChkaO54804 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ChkaO54804 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ChkaO54804 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ChkaO54804 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ChkaO54804 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ChkaO54804 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ChkaO54804 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14□□□□□ -0.17
ChkaO54804 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ChkaO54804 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ChkaO54804 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14□□□□□ -0.17
ChkaO54804 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ChkaO54804 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
ChkaO54804 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
ChkaO54804 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ChkaO54804 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ChkaO54804 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ChkaO54804 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14□□□□□ -0.17
ChkaO54804 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14□□□□□ -0.17
ChkaO54804 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14□□□□□ -0.17
ChkaO54804 Gm5779-201ENSMUST00000218467 910 ntBASIC14□□□□□ -0.17
ChkaO54804 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14□□□□□ -0.17
ChkaO54804 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
ChkaO54804 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ChkaO54804 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14□□□□□ -0.17
ChkaO54804 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ChkaO54804 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
ChkaO54804 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ChkaO54804 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ChkaO54804 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ChkaO54804 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14□□□□□ -0.17
ChkaO54804 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ChkaO54804 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.99□□□□□ -0.17
ChkaO54804 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ChkaO54804 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ChkaO54804 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ChkaO54804 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ChkaO54804 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ChkaO54804 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
ChkaO54804 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ChkaO54804 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ChkaO54804 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
ChkaO54804 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ChkaO54804 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ChkaO54804 Gm24158-201ENSMUST00000175263 71 ntBASIC13.99□□□□□ -0.17
ChkaO54804 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ChkaO54804 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.99□□□□□ -0.17
ChkaO54804 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.99□□□□□ -0.17
ChkaO54804 Gm2756-201ENSMUST00000195851 400 ntBASIC13.99□□□□□ -0.17
ChkaO54804 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.99□□□□□ -0.17
ChkaO54804 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ChkaO54804 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
ChkaO54804 Mir497b-201ENSMUST00000093601 125 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms