Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Matn3O35701 Gm4535-201ENSMUST00000182274 558 ntBASIC12.59□□□□□ -0.39
Matn3O35701 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.59□□□□□ -0.39
Matn3O35701 Gm45747-201ENSMUST00000212203 999 ntBASIC12.59□□□□□ -0.39
Matn3O35701 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.59□□□□□ -0.39
Matn3O35701 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.59□□□□□ -0.39
Matn3O35701 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn3O35701 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn3O35701 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn3O35701 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn3O35701 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn3O35701 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn3O35701 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Matn3O35701 Gm10275-201ENSMUST00000092620 635 ntBASIC12.59□□□□□ -0.39
Matn3O35701 Gm10355-201ENSMUST00000097146 517 ntBASIC12.59□□□□□ -0.39
Matn3O35701 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn3O35701 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn3O35701 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.59□□□□□ -0.39
Matn3O35701 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn3O35701 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn3O35701 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn3O35701 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn3O35701 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.59□□□□□ -0.39
Matn3O35701 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn3O35701 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Matn3O35701 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn3O35701 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn3O35701 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Matn3O35701 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn3O35701 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn3O35701 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn3O35701 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn3O35701 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn3O35701 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Matn3O35701 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Matn3O35701 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Matn3O35701 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Matn3O35701 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn3O35701 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Matn3O35701 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn3O35701 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Matn3O35701 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn3O35701 Gm25990-201ENSMUST00000102440 86 ntBASIC12.58□□□□□ -0.4
Matn3O35701 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Matn3O35701 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn3O35701 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.58□□□□□ -0.4
Matn3O35701 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn3O35701 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Matn3O35701 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn3O35701 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.58□□□□□ -0.4
Matn3O35701 Gm7230-201ENSMUST00000173026 815 ntBASIC12.58□□□□□ -0.4
Matn3O35701 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn3O35701 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.58□□□□□ -0.4
Matn3O35701 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.58□□□□□ -0.4
Matn3O35701 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.58□□□□□ -0.4
Matn3O35701 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn3O35701 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Matn3O35701 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Matn3O35701 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn3O35701 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn3O35701 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Matn3O35701 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn3O35701 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.58□□□□□ -0.4
Matn3O35701 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn3O35701 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Matn3O35701 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.57□□□□□ -0.4
Matn3O35701 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Matn3O35701 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.57□□□□□ -0.4
Matn3O35701 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.57□□□□□ -0.4
Matn3O35701 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
Matn3O35701 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.57□□□□□ -0.4
Matn3O35701 Gm8000-201ENSMUST00000188378 592 ntBASIC12.57□□□□□ -0.4
Matn3O35701 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.57□□□□□ -0.4
Matn3O35701 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.57□□□□□ -0.4
Matn3O35701 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.57□□□□□ -0.4
Matn3O35701 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.57□□□□□ -0.4
Matn3O35701 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.57□□□□□ -0.4
Matn3O35701 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.57□□□□□ -0.4
Matn3O35701 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn3O35701 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms