Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Phox2bO35690 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Phox2bO35690 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Phox2bO35690 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Phox2bO35690 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phox2bO35690 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phox2bO35690 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Phox2bO35690 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phox2bO35690 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.03□□□□□ -0.16
Phox2bO35690 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.03□□□□□ -0.16
Phox2bO35690 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Phox2bO35690 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phox2bO35690 Gm15393-201ENSMUST00000120499 219 ntBASIC14.03□□□□□ -0.16
Phox2bO35690 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.03□□□□□ -0.16
Phox2bO35690 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Phox2bO35690 Gm24514-201ENSMUST00000174961 285 ntBASIC14.03□□□□□ -0.16
Phox2bO35690 Gm25026-201ENSMUST00000175017 188 ntBASIC14.03□□□□□ -0.16
Phox2bO35690 Ap1g1-206ENSMUST00000179104 1096 ntBASIC14.03□□□□□ -0.16
Phox2bO35690 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.03□□□□□ -0.16
Phox2bO35690 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Phox2bO35690 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phox2bO35690 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Phox2bO35690 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Phox2bO35690 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phox2bO35690 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.03□□□□□ -0.16
Phox2bO35690 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phox2bO35690 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phox2bO35690 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Phox2bO35690 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phox2bO35690 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phox2bO35690 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phox2bO35690 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Phox2bO35690 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phox2bO35690 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Phox2bO35690 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phox2bO35690 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Phox2bO35690 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Phox2bO35690 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Phox2bO35690 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Phox2bO35690 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Phox2bO35690 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Phox2bO35690 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Phox2bO35690 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Phox2bO35690 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Phox2bO35690 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Phox2bO35690 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Phox2bO35690 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Phox2bO35690 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Phox2bO35690 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Phox2bO35690 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Phox2bO35690 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Phox2bO35690 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phox2bO35690 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phox2bO35690 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phox2bO35690 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Phox2bO35690 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phox2bO35690 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Phox2bO35690 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.02□□□□□ -0.17
Phox2bO35690 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.02□□□□□ -0.17
Phox2bO35690 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phox2bO35690 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Phox2bO35690 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phox2bO35690 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Phox2bO35690 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phox2bO35690 Mir7032-201ENSMUST00000185154 79 ntBASIC14.02□□□□□ -0.17
Phox2bO35690 Gm38002-201ENSMUST00000193255 180 ntBASIC14.02□□□□□ -0.17
Phox2bO35690 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Phox2bO35690 Gm44387-201ENSMUST00000196298 145 ntBASIC14.02□□□□□ -0.17
Phox2bO35690 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.02□□□□□ -0.17
Phox2bO35690 Gm29787-201ENSMUST00000222129 849 ntBASIC14.02□□□□□ -0.17
Phox2bO35690 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phox2bO35690 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phox2bO35690 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Phox2bO35690 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Phox2bO35690 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phox2bO35690 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Phox2bO35690 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phox2bO35690 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phox2bO35690 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phox2bO35690 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phox2bO35690 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Phox2bO35690 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.01□□□□□ -0.17
Phox2bO35690 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Phox2bO35690 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phox2bO35690 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phox2bO35690 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Phox2bO35690 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phox2bO35690 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phox2bO35690 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Phox2bO35690 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phox2bO35690 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Phox2bO35690 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phox2bO35690 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Phox2bO35690 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.01□□□□□ -0.17
Phox2bO35690 Gm12928-201ENSMUST00000117115 573 ntBASIC14.01□□□□□ -0.17
Phox2bO35690 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Phox2bO35690 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Phox2bO35690 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.01□□□□□ -0.17
Phox2bO35690 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Phox2bO35690 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms