Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Efnb3O35393 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Efnb3O35393 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Efnb3O35393 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Efnb3O35393 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Efnb3O35393 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Efnb3O35393 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Efnb3O35393 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Efnb3O35393 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Efnb3O35393 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Efnb3O35393 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Efnb3O35393 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Efnb3O35393 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Efnb3O35393 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Efnb3O35393 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC10.96□□□□□ -0.65
Efnb3O35393 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Efnb3O35393 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC10.96□□□□□ -0.65
Efnb3O35393 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC10.96□□□□□ -0.65
Efnb3O35393 Mir7036b-201ENSMUST00000184791 63 ntBASIC10.96□□□□□ -0.65
Efnb3O35393 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC10.96□□□□□ -0.65
Efnb3O35393 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC10.96□□□□□ -0.65
Efnb3O35393 AW822252-206ENSMUST00000208904 237 ntBASIC10.96□□□□□ -0.65
Efnb3O35393 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC10.96□□□□□ -0.65
Efnb3O35393 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC10.96□□□□□ -0.65
Efnb3O35393 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Efnb3O35393 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Efnb3O35393 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC10.96□□□□□ -0.65
Efnb3O35393 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Efnb3O35393 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Efnb3O35393 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Efnb3O35393 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Efnb3O35393 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Efnb3O35393 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Efnb3O35393 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Efnb3O35393 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Efnb3O35393 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Efnb3O35393 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.95□□□□□ -0.66
Efnb3O35393 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Efnb3O35393 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC10.95□□□□□ -0.66
Efnb3O35393 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC10.95□□□□□ -0.66
Efnb3O35393 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Efnb3O35393 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.95□□□□□ -0.66
Efnb3O35393 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Gm15467-201ENSMUST00000120582 445 ntBASIC10.95□□□□□ -0.66
Efnb3O35393 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC10.95□□□□□ -0.66
Efnb3O35393 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC10.95□□□□□ -0.66
Efnb3O35393 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC10.95□□□□□ -0.66
Efnb3O35393 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC10.95□□□□□ -0.66
Efnb3O35393 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Efnb3O35393 Klk2-ps-201ENSMUST00000205342 571 ntBASIC10.95□□□□□ -0.66
Efnb3O35393 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC10.95□□□□□ -0.66
Efnb3O35393 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Rubie-203ENSMUST00000227803 2430 ntBASIC10.95□□□□□ -0.66
Efnb3O35393 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Efnb3O35393 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Efnb3O35393 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Efnb3O35393 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Efnb3O35393 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Efnb3O35393 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Efnb3O35393 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Efnb3O35393 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.94□□□□□ -0.66
Efnb3O35393 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Efnb3O35393 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Efnb3O35393 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Efnb3O35393 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Efnb3O35393 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Efnb3O35393 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Efnb3O35393 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Efnb3O35393 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Efnb3O35393 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Efnb3O35393 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC10.94□□□□□ -0.66
Efnb3O35393 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms