Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Polr1aO35134 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Polr1aO35134 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Polr1aO35134 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
Polr1aO35134 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Polr1aO35134 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Polr1aO35134 Gm12500-202ENSMUST00000186471 2428 ntBASIC20.91■□□□□ 0.94
Polr1aO35134 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
Polr1aO35134 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Polr1aO35134 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Polr1aO35134 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Polr1aO35134 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Polr1aO35134 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Polr1aO35134 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Polr1aO35134 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Polr1aO35134 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Polr1aO35134 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Polr1aO35134 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Polr1aO35134 Gm22121-201ENSMUST00000175148 54 ntBASIC20.9■□□□□ 0.94
Polr1aO35134 Gm2383-201ENSMUST00000181461 807 ntBASIC20.9■□□□□ 0.94
Polr1aO35134 Mettl6-204ENSMUST00000227595 1027 ntBASIC20.9■□□□□ 0.94
Polr1aO35134 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Polr1aO35134 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Polr1aO35134 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Polr1aO35134 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Polr1aO35134 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Polr1aO35134 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Polr1aO35134 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Polr1aO35134 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC20.9■□□□□ 0.94
Polr1aO35134 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Polr1aO35134 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Polr1aO35134 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Polr1aO35134 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC20.9■□□□□ 0.94
Polr1aO35134 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Polr1aO35134 Gm6082-201ENSMUST00000215204 454 ntBASIC20.9■□□□□ 0.94
Polr1aO35134 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Polr1aO35134 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Polr1aO35134 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Polr1aO35134 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Polr1aO35134 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.94
Polr1aO35134 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Polr1aO35134 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Polr1aO35134 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC20.89■□□□□ 0.93
Polr1aO35134 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Polr1aO35134 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC20.89■□□□□ 0.93
Polr1aO35134 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC20.89■□□□□ 0.93
Polr1aO35134 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Polr1aO35134 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Polr1aO35134 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Polr1aO35134 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Polr1aO35134 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Polr1aO35134 Gm37466-201ENSMUST00000195692 652 ntBASIC20.89■□□□□ 0.93
Polr1aO35134 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC20.89■□□□□ 0.93
Polr1aO35134 n-R5s77-201ENSMUST00000083757 119 ntBASIC20.89■□□□□ 0.93
Polr1aO35134 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Polr1aO35134 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Polr1aO35134 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Polr1aO35134 Gm7899-201ENSMUST00000192935 1897 ntBASIC20.88■□□□□ 0.93
Polr1aO35134 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Polr1aO35134 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Polr1aO35134 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Polr1aO35134 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Polr1aO35134 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Polr1aO35134 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Polr1aO35134 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC20.88■□□□□ 0.93
Polr1aO35134 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Polr1aO35134 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC20.88■□□□□ 0.93
Polr1aO35134 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Polr1aO35134 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Polr1aO35134 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC20.88■□□□□ 0.93
Polr1aO35134 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Polr1aO35134 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Polr1aO35134 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Polr1aO35134 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Polr1aO35134 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Polr1aO35134 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Polr1aO35134 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC20.87■□□□□ 0.93
Polr1aO35134 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Polr1aO35134 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Polr1aO35134 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC20.87■□□□□ 0.93
Polr1aO35134 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Polr1aO35134 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Polr1aO35134 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Polr1aO35134 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Polr1aO35134 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Polr1aO35134 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Polr1aO35134 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Polr1aO35134 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Polr1aO35134 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Polr1aO35134 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Polr1aO35134 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Polr1aO35134 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Polr1aO35134 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Polr1aO35134 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Polr1aO35134 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Polr1aO35134 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Polr1aO35134 Gm15897-201ENSMUST00000117770 1486 ntBASIC20.87■□□□□ 0.93
Polr1aO35134 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Polr1aO35134 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Polr1aO35134 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms