Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.24□□□□□ -0.13
Trove2O08848 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Trove2O08848 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trove2O08848 Gm17271-201ENSMUST00000165535 355 ntBASIC14.24□□□□□ -0.13
Trove2O08848 Gm44492-201ENSMUST00000197012 141 ntBASIC14.24□□□□□ -0.13
Trove2O08848 Gm6443-201ENSMUST00000203599 874 ntBASIC14.24□□□□□ -0.13
Trove2O08848 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.24□□□□□ -0.13
Trove2O08848 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.24□□□□□ -0.13
Trove2O08848 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.24□□□□□ -0.13
Trove2O08848 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trove2O08848 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trove2O08848 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trove2O08848 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trove2O08848 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trove2O08848 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trove2O08848 Gm15467-201ENSMUST00000120582 445 ntBASIC14.23□□□□□ -0.13
Trove2O08848 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trove2O08848 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.23□□□□□ -0.13
Trove2O08848 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.23□□□□□ -0.13
Trove2O08848 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.23□□□□□ -0.13
Trove2O08848 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trove2O08848 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.23□□□□□ -0.13
Trove2O08848 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trove2O08848 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trove2O08848 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trove2O08848 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trove2O08848 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trove2O08848 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trove2O08848 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trove2O08848 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trove2O08848 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Trove2O08848 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trove2O08848 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trove2O08848 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trove2O08848 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trove2O08848 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trove2O08848 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trove2O08848 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Trove2O08848 Gm9385-201ENSMUST00000117563 472 ntBASIC14.22□□□□□ -0.13
Trove2O08848 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.22□□□□□ -0.13
Trove2O08848 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.22□□□□□ -0.13
Trove2O08848 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trove2O08848 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trove2O08848 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trove2O08848 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trove2O08848 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trove2O08848 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.22□□□□□ -0.13
Trove2O08848 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trove2O08848 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trove2O08848 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trove2O08848 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms