Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm11236J3QMS7 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm11236J3QMS7 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.42□□□□□ -0.1
Gm11236J3QMS7 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm11236J3QMS7 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Gm11236J3QMS7 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm11236J3QMS7 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm11236J3QMS7 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm11236J3QMS7 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm11236J3QMS7 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm11236J3QMS7 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Gm11236J3QMS7 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm11236J3QMS7 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm11236J3QMS7 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm11236J3QMS7 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm11236J3QMS7 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm11236J3QMS7 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm11236J3QMS7 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm11236J3QMS7 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm11236J3QMS7 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.42□□□□□ -0.1
Gm11236J3QMS7 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm11236J3QMS7 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Gm23931-201ENSMUST00000103842 109 ntBASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Gm5187-201ENSMUST00000117317 991 ntBASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Mir6420-201ENSMUST00000185032 102 ntBASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Gm5370-201ENSMUST00000187187 574 ntBASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Gm29608-201ENSMUST00000190444 463 ntBASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.41□□□□□ -0.1
Gm11236J3QMS7 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.41□□□□□ -0.1
Gm11236J3QMS7 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm11236J3QMS7 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm11236J3QMS7 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm11236J3QMS7 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm11236J3QMS7 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms