Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NpcdF8VQB8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
NpcdF8VQB8 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.62■□□□□ 0.25
NpcdF8VQB8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NpcdF8VQB8 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NpcdF8VQB8 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC16.62■□□□□ 0.25
NpcdF8VQB8 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NpcdF8VQB8 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NpcdF8VQB8 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC16.62■□□□□ 0.25
NpcdF8VQB8 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC16.62■□□□□ 0.25
NpcdF8VQB8 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NpcdF8VQB8 Gm43138-201ENSMUST00000199123 708 ntBASIC16.62■□□□□ 0.25
NpcdF8VQB8 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC16.62■□□□□ 0.25
NpcdF8VQB8 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NpcdF8VQB8 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NpcdF8VQB8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NpcdF8VQB8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NpcdF8VQB8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NpcdF8VQB8 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NpcdF8VQB8 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NpcdF8VQB8 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NpcdF8VQB8 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NpcdF8VQB8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NpcdF8VQB8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NpcdF8VQB8 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC16.61■□□□□ 0.25
NpcdF8VQB8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NpcdF8VQB8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NpcdF8VQB8 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NpcdF8VQB8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NpcdF8VQB8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NpcdF8VQB8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NpcdF8VQB8 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NpcdF8VQB8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NpcdF8VQB8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NpcdF8VQB8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NpcdF8VQB8 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC16.61■□□□□ 0.25
NpcdF8VQB8 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC16.61■□□□□ 0.25
NpcdF8VQB8 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NpcdF8VQB8 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC16.61■□□□□ 0.25
NpcdF8VQB8 Gm5363-201ENSMUST00000211927 938 ntBASIC16.61■□□□□ 0.25
NpcdF8VQB8 Gm18027-201ENSMUST00000218947 619 ntBASIC16.61■□□□□ 0.25
NpcdF8VQB8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NpcdF8VQB8 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NpcdF8VQB8 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC16.61■□□□□ 0.25
NpcdF8VQB8 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NpcdF8VQB8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NpcdF8VQB8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NpcdF8VQB8 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NpcdF8VQB8 AC113441.2-201ENSMUST00000221538 1468 ntBASIC16.61■□□□□ 0.25
NpcdF8VQB8 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.6■□□□□ 0.25
NpcdF8VQB8 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.6■□□□□ 0.25
NpcdF8VQB8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NpcdF8VQB8 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NpcdF8VQB8 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NpcdF8VQB8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NpcdF8VQB8 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NpcdF8VQB8 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NpcdF8VQB8 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NpcdF8VQB8 Gm7118-201ENSMUST00000200167 1003 ntBASIC16.6■□□□□ 0.25
NpcdF8VQB8 AC155637.1-201ENSMUST00000218560 636 ntBASIC16.6■□□□□ 0.25
NpcdF8VQB8 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NpcdF8VQB8 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NpcdF8VQB8 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.6■□□□□ 0.25
NpcdF8VQB8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NpcdF8VQB8 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NpcdF8VQB8 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NpcdF8VQB8 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NpcdF8VQB8 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NpcdF8VQB8 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NpcdF8VQB8 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NpcdF8VQB8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NpcdF8VQB8 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.59■□□□□ 0.25
NpcdF8VQB8 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NpcdF8VQB8 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC16.59■□□□□ 0.25
NpcdF8VQB8 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC16.59■□□□□ 0.25
NpcdF8VQB8 Gm12176-201ENSMUST00000121420 875 ntBASIC16.59■□□□□ 0.25
NpcdF8VQB8 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC16.59■□□□□ 0.25
NpcdF8VQB8 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NpcdF8VQB8 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.59■□□□□ 0.25
NpcdF8VQB8 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NpcdF8VQB8 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NpcdF8VQB8 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC16.59■□□□□ 0.25
NpcdF8VQB8 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NpcdF8VQB8 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.59■□□□□ 0.25
NpcdF8VQB8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NpcdF8VQB8 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NpcdF8VQB8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NpcdF8VQB8 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NpcdF8VQB8 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
NpcdF8VQB8 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NpcdF8VQB8 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.59■□□□□ 0.25
NpcdF8VQB8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NpcdF8VQB8 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NpcdF8VQB8 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NpcdF8VQB8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NpcdF8VQB8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
NpcdF8VQB8 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NpcdF8VQB8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NpcdF8VQB8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NpcdF8VQB8 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms