Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC13.51□□□□□ -0.25
Col6a3E9PWQ3 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a3E9PWQ3 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Gm11892-201ENSMUST00000117711 1202 ntBASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Gm17208-201ENSMUST00000168388 535 ntBASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Gm19091-201ENSMUST00000208120 978 ntBASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Gm18204-201ENSMUST00000209835 793 ntBASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Gm4768-201ENSMUST00000206199 686 ntBASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a3E9PWQ3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 Gm13296-201ENSMUST00000117854 997 ntBASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 108.5 ms