Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm10275-201ENSMUST00000092620 635 ntBASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm10812-201ENSMUST00000099864 546 ntBASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccnb1ip1D3Z3K2 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccnb1ip1D3Z3K2 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ccnb1ip1D3Z3K2 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccnb1ip1D3Z3K2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.47□□□□□ -0.41
Ccnb1ip1D3Z3K2 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccnb1ip1D3Z3K2 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.47□□□□□ -0.41
Ccnb1ip1D3Z3K2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccnb1ip1D3Z3K2 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccnb1ip1D3Z3K2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccnb1ip1D3Z3K2 Paupar-201ENSMUST00000194826 3482 ntBASIC12.47□□□□□ -0.41
Ccnb1ip1D3Z3K2 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccnb1ip1D3Z3K2 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccnb1ip1D3Z3K2 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccnb1ip1D3Z3K2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ccnb1ip1D3Z3K2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ccnb1ip1D3Z3K2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.47□□□□□ -0.41
Ccnb1ip1D3Z3K2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.47□□□□□ -0.41
Ccnb1ip1D3Z3K2 Gm37153-201ENSMUST00000193637 231 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms