Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.57□□□□□ -0.4
Gm3543D3Z235 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.57□□□□□ -0.4
Gm3543D3Z235 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.56□□□□□ -0.4
Gm3543D3Z235 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Gm8584-201ENSMUST00000171982 758 ntBASIC12.56□□□□□ -0.4
Gm3543D3Z235 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Gm7730-201ENSMUST00000212486 454 ntBASIC12.56□□□□□ -0.4
Gm3543D3Z235 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.56□□□□□ -0.4
Gm3543D3Z235 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.56□□□□□ -0.4
Gm3543D3Z235 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.56□□□□□ -0.4
Gm3543D3Z235 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3543D3Z235 BC001981-202ENSMUST00000191393 1545 ntBASIC12.56□□□□□ -0.4
Gm3543D3Z235 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.56□□□□□ -0.4
Gm3543D3Z235 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm3543D3Z235 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3543D3Z235 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.55□□□□□ -0.4
Gm3543D3Z235 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.55□□□□□ -0.4
Gm3543D3Z235 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Gm12882-201ENSMUST00000121696 517 ntBASIC12.55□□□□□ -0.4
Gm3543D3Z235 Gm15487-201ENSMUST00000122373 465 ntBASIC12.55□□□□□ -0.4
Gm3543D3Z235 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.55□□□□□ -0.4
Gm3543D3Z235 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3543D3Z235 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3543D3Z235 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Syt7-204ENSMUST00000223586 1344 ntBASIC12.55□□□□□ -0.4
Gm3543D3Z235 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3543D3Z235 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.55□□□□□ -0.4
Gm3543D3Z235 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.54□□□□□ -0.4
Gm3543D3Z235 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3543D3Z235 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3543D3Z235 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3543D3Z235 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3543D3Z235 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Gm3543D3Z235 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3543D3Z235 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3543D3Z235 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3543D3Z235 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.54□□□□□ -0.4
Gm3543D3Z235 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms