Protein–RNA interactions for Protein: D3YXE9

BC048679, cDNA sequence BC048679, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC048679D3YXE9 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
BC048679D3YXE9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
BC048679D3YXE9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
BC048679D3YXE9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
BC048679D3YXE9 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
BC048679D3YXE9 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
BC048679D3YXE9 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
BC048679D3YXE9 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
BC048679D3YXE9 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
BC048679D3YXE9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
BC048679D3YXE9 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
BC048679D3YXE9 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
BC048679D3YXE9 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
BC048679D3YXE9 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
BC048679D3YXE9 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.62□□□□□ -0.55
BC048679D3YXE9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
BC048679D3YXE9 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
BC048679D3YXE9 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
BC048679D3YXE9 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
BC048679D3YXE9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
BC048679D3YXE9 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.62□□□□□ -0.55
BC048679D3YXE9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
BC048679D3YXE9 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.61□□□□□ -0.55
BC048679D3YXE9 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.61□□□□□ -0.55
BC048679D3YXE9 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
BC048679D3YXE9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.61□□□□□ -0.55
BC048679D3YXE9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Gm10275-202ENSMUST00000168697 495 ntBASIC11.61□□□□□ -0.55
BC048679D3YXE9 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Gm44492-201ENSMUST00000197012 141 ntBASIC11.61□□□□□ -0.55
BC048679D3YXE9 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Gm10275-201ENSMUST00000092620 635 ntBASIC11.61□□□□□ -0.55
BC048679D3YXE9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
BC048679D3YXE9 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
BC048679D3YXE9 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
BC048679D3YXE9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
BC048679D3YXE9 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
BC048679D3YXE9 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
BC048679D3YXE9 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
BC048679D3YXE9 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
BC048679D3YXE9 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
BC048679D3YXE9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
BC048679D3YXE9 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms