Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 Gm2810-201ENSMUST00000118681 990 ntBASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav12d-1A0N8R0 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Trav12d-1A0N8R0 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Trav12d-1A0N8R0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav12d-1A0N8R0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Trav12d-1A0N8R0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav12d-1A0N8R0 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Gm20553-201ENSMUST00000204205 844 ntBASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav12d-1A0N8R0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav12d-1A0N8R0 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav12d-1A0N8R0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav12d-1A0N8R0 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav12d-1A0N8R0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav12d-1A0N8R0 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav12d-1A0N8R0 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav12d-1A0N8R0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav12d-1A0N8R0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav12d-1A0N8R0 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav12d-1A0N8R0 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav12d-1A0N8R0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav12d-1A0N8R0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav12d-1A0N8R0 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav12d-1A0N8R0 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav12d-1A0N8R0 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trav12d-1A0N8R0 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.13□□□□□ -0.63
Trav12d-1A0N8R0 Gm13823-201ENSMUST00000119930 345 ntBASIC11.13□□□□□ -0.63
Trav12d-1A0N8R0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.13□□□□□ -0.63
Trav12d-1A0N8R0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav12d-1A0N8R0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms