Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gm44719-201ENSMUST00000206404 149 ntBASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gm17795-201ENSMUST00000214505 757 ntBASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gm9797-201ENSMUST00000052902 613 ntBASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Atg4a-psA0A0G2JFS9 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.8■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.8■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.8■□□□□ 0.28
Atg4a-psA0A0G2JFS9 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg4a-psA0A0G2JFS9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.8■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atg4a-psA0A0G2JFS9 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atg4a-psA0A0G2JFS9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.79■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Atg4a-psA0A0G2JFS9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.79■□□□□ 0.28
Atg4a-psA0A0G2JFS9 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.79■□□□□ 0.28
Atg4a-psA0A0G2JFS9 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.79■□□□□ 0.28
Atg4a-psA0A0G2JFS9 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.79■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atg4a-psA0A0G2JFS9 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms