Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
PdfS4R2K0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC10.66□□□□□ -0.7
PdfS4R2K0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
PdfS4R2K0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC10.66□□□□□ -0.7
PdfS4R2K0 Gm5682-201ENSMUST00000173402 505 ntBASIC10.66□□□□□ -0.7
PdfS4R2K0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC10.66□□□□□ -0.7
PdfS4R2K0 Gm5264-201ENSMUST00000190584 848 ntBASIC10.66□□□□□ -0.7
PdfS4R2K0 Gm9682-201ENSMUST00000197505 556 ntBASIC10.66□□□□□ -0.7
PdfS4R2K0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC10.66□□□□□ -0.7
PdfS4R2K0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC10.66□□□□□ -0.7
PdfS4R2K0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
PdfS4R2K0 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
PdfS4R2K0 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
PdfS4R2K0 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
PdfS4R2K0 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC10.66□□□□□ -0.7
PdfS4R2K0 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
PdfS4R2K0 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
PdfS4R2K0 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.65□□□□□ -0.7
PdfS4R2K0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PdfS4R2K0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC10.65□□□□□ -0.7
PdfS4R2K0 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC10.65□□□□□ -0.7
PdfS4R2K0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PdfS4R2K0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
PdfS4R2K0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PdfS4R2K0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC10.65□□□□□ -0.7
PdfS4R2K0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PdfS4R2K0 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
PdfS4R2K0 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.65□□□□□ -0.7
PdfS4R2K0 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PdfS4R2K0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
PdfS4R2K0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
PdfS4R2K0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
PdfS4R2K0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PdfS4R2K0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PdfS4R2K0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC10.65□□□□□ -0.7
PdfS4R2K0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC10.65□□□□□ -0.7
PdfS4R2K0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC10.65□□□□□ -0.7
PdfS4R2K0 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PdfS4R2K0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PdfS4R2K0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PdfS4R2K0 AC132104.2-201ENSMUST00000215011 266 ntBASIC10.65□□□□□ -0.7
PdfS4R2K0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
PdfS4R2K0 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PdfS4R2K0 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PdfS4R2K0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PdfS4R2K0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PdfS4R2K0 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
PdfS4R2K0 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
PdfS4R2K0 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PdfS4R2K0 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
PdfS4R2K0 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
PdfS4R2K0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PdfS4R2K0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC10.65□□□□□ -0.7
PdfS4R2K0 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PdfS4R2K0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.71
PdfS4R2K0 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
PdfS4R2K0 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
PdfS4R2K0 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
PdfS4R2K0 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
PdfS4R2K0 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
PdfS4R2K0 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
PdfS4R2K0 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.65□□□□□ -0.71
PdfS4R2K0 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
PdfS4R2K0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
PdfS4R2K0 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PdfS4R2K0 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
PdfS4R2K0 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
PdfS4R2K0 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
PdfS4R2K0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
PdfS4R2K0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC10.64□□□□□ -0.71
PdfS4R2K0 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PdfS4R2K0 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
PdfS4R2K0 Gm5366-201ENSMUST00000215494 1338 ntBASIC10.64□□□□□ -0.71
PdfS4R2K0 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
PdfS4R2K0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
PdfS4R2K0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
PdfS4R2K0 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PdfS4R2K0 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PdfS4R2K0 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PdfS4R2K0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PdfS4R2K0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms