Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcsQ9WU84 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CcsQ9WU84 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CcsQ9WU84 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcsQ9WU84 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CcsQ9WU84 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CcsQ9WU84 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcsQ9WU84 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcsQ9WU84 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcsQ9WU84 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcsQ9WU84 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CcsQ9WU84 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcsQ9WU84 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcsQ9WU84 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcsQ9WU84 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CcsQ9WU84 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcsQ9WU84 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcsQ9WU84 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
CcsQ9WU84 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC10.8□□□□□ -0.68
CcsQ9WU84 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC10.8□□□□□ -0.68
CcsQ9WU84 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
CcsQ9WU84 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
CcsQ9WU84 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
CcsQ9WU84 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
CcsQ9WU84 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
CcsQ9WU84 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC10.8□□□□□ -0.68
CcsQ9WU84 Mir8117-201ENSMUST00000184773 107 ntBASIC10.8□□□□□ -0.68
CcsQ9WU84 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC10.8□□□□□ -0.68
CcsQ9WU84 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
CcsQ9WU84 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
CcsQ9WU84 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 AC154262.2-201ENSMUST00000224310 2293 ntBASIC10.8□□□□□ -0.68
CcsQ9WU84 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
CcsQ9WU84 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
CcsQ9WU84 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CcsQ9WU84 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.8□□□□□ -0.68
CcsQ9WU84 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
CcsQ9WU84 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC10.79□□□□□ -0.68
CcsQ9WU84 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CcsQ9WU84 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CcsQ9WU84 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC10.79□□□□□ -0.68
CcsQ9WU84 Gm4899-201ENSMUST00000178708 719 ntBASIC10.79□□□□□ -0.68
CcsQ9WU84 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC10.79□□□□□ -0.68
CcsQ9WU84 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
CcsQ9WU84 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CcsQ9WU84 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
CcsQ9WU84 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
CcsQ9WU84 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
CcsQ9WU84 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms