Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Scn8aQ9WTU3 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scn8aQ9WTU3 Gm12928-201ENSMUST00000117115 573 ntBASIC13.86□□□□□ -0.19
Scn8aQ9WTU3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.86□□□□□ -0.19
Scn8aQ9WTU3 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scn8aQ9WTU3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Scn8aQ9WTU3 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.86□□□□□ -0.19
Scn8aQ9WTU3 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.86□□□□□ -0.19
Scn8aQ9WTU3 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn8aQ9WTU3 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn8aQ9WTU3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scn8aQ9WTU3 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn8aQ9WTU3 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scn8aQ9WTU3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Scn8aQ9WTU3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn8aQ9WTU3 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.86□□□□□ -0.19
Scn8aQ9WTU3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn8aQ9WTU3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Scn8aQ9WTU3 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn8aQ9WTU3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn8aQ9WTU3 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Scn8aQ9WTU3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn8aQ9WTU3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn8aQ9WTU3 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn8aQ9WTU3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn8aQ9WTU3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Gm12390-201ENSMUST00000117897 397 ntBASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn8aQ9WTU3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 Gm24644-201ENSMUST00000157114 139 ntBASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 Gm7287-201ENSMUST00000205267 602 ntBASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn8aQ9WTU3 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms