Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.27
Upk3aQ9JKX8 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.33□□□□□ -0.27
Upk3aQ9JKX8 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Upk3aQ9JKX8 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Upk3aQ9JKX8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Gm27772-201ENSMUST00000184900 187 ntBASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Mir6977-201ENSMUST00000184960 64 ntBASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upk3aQ9JKX8 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Gm2423-201ENSMUST00000074863 733 ntBASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk3aQ9JKX8 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk3aQ9JKX8 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms