Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rtp4Q9ER80 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rtp4Q9ER80 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rtp4Q9ER80 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rtp4Q9ER80 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rtp4Q9ER80 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rtp4Q9ER80 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rtp4Q9ER80 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rtp4Q9ER80 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rtp4Q9ER80 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rtp4Q9ER80 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.02□□□□□ -0.33
Rtp4Q9ER80 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Gm20445-201ENSMUST00000061905 565 ntBASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rtp4Q9ER80 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Rtp4Q9ER80 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rtp4Q9ER80 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rtp4Q9ER80 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Gm6159-201ENSMUST00000191249 1724 ntBASIC13□□□□□ -0.33
Rtp4Q9ER80 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Gm45751-201ENSMUST00000210185 1573 ntBASIC13□□□□□ -0.33
Rtp4Q9ER80 Gm18244-201ENSMUST00000219747 1566 ntBASIC13□□□□□ -0.33
Rtp4Q9ER80 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rtp4Q9ER80 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Gm12859-201ENSMUST00000117834 427 ntBASIC13□□□□□ -0.33
Rtp4Q9ER80 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13□□□□□ -0.33
Rtp4Q9ER80 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13□□□□□ -0.33
Rtp4Q9ER80 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rtp4Q9ER80 Gm9522-201ENSMUST00000182394 926 ntBASIC13□□□□□ -0.33
Rtp4Q9ER80 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13□□□□□ -0.33
Rtp4Q9ER80 Gm45691-201ENSMUST00000206905 1120 ntBASIC13□□□□□ -0.33
Rtp4Q9ER80 Gm7390-201ENSMUST00000212452 1216 ntBASIC13□□□□□ -0.33
Rtp4Q9ER80 Gm9229-201ENSMUST00000222777 126 ntBASIC13□□□□□ -0.33
Rtp4Q9ER80 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rtp4Q9ER80 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13□□□□□ -0.33
Rtp4Q9ER80 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rtp4Q9ER80 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13□□□□□ -0.33
Rtp4Q9ER80 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rtp4Q9ER80 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rtp4Q9ER80 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rtp4Q9ER80 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rtp4Q9ER80 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rtp4Q9ER80 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rtp4Q9ER80 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rtp4Q9ER80 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rtp4Q9ER80 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms