Protein–RNA interactions for Protein: Q9EQR4

Clca3a2, Chloride channel accessory 3A2, mousemouse

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3a2Q9EQR4 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clca3a2Q9EQR4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.28□□□□□ -0.28
Clca3a2Q9EQR4 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clca3a2Q9EQR4 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clca3a2Q9EQR4 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clca3a2Q9EQR4 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clca3a2Q9EQR4 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clca3a2Q9EQR4 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Clca3a2Q9EQR4 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Clca3a2Q9EQR4 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clca3a2Q9EQR4 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clca3a2Q9EQR4 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clca3a2Q9EQR4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clca3a2Q9EQR4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Clca3a2Q9EQR4 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Clca3a2Q9EQR4 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Clca3a2Q9EQR4 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clca3a2Q9EQR4 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clca3a2Q9EQR4 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clca3a2Q9EQR4 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Clca3a2Q9EQR4 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clca3a2Q9EQR4 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clca3a2Q9EQR4 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clca3a2Q9EQR4 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Gm8927-201ENSMUST00000181978 981 ntBASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Mir7023-201ENSMUST00000185093 64 ntBASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Gm3222-201ENSMUST00000071282 990 ntBASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clca3a2Q9EQR4 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Gm24420-201ENSMUST00000176676 59 ntBASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Mir8102-201ENSMUST00000184148 139 ntBASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Gm27989-201ENSMUST00000184721 107 ntBASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clca3a2Q9EQR4 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clca3a2Q9EQR4 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Clca3a2Q9EQR4 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.25□□□□□ -0.29
Clca3a2Q9EQR4 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clca3a2Q9EQR4 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clca3a2Q9EQR4 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.25□□□□□ -0.29
Clca3a2Q9EQR4 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Clca3a2Q9EQR4 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Clca3a2Q9EQR4 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.25□□□□□ -0.29
Clca3a2Q9EQR4 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clca3a2Q9EQR4 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Clca3a2Q9EQR4 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms