Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Gm6023-201ENSMUST00000118217 606 ntBASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Gm16379-201ENSMUST00000161469 348 ntBASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Gm29741-201ENSMUST00000192667 421 ntBASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Gm8762-201ENSMUST00000193486 339 ntBASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nkx2-4Q9EQM3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Gm16505-201ENSMUST00000179981 232 ntBASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Gm26315-201ENSMUST00000083890 321 ntBASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nkx2-4Q9EQM3 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Nkx2-4Q9EQM3 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Nkx2-4Q9EQM3 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Nkx2-4Q9EQM3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 Carlr-201ENSMUST00000181515 2574 ntBASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 Gm13297-201ENSMUST00000120205 934 ntBASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 Gm6222-202ENSMUST00000182143 629 ntBASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 Gm27341-201ENSMUST00000183570 106 ntBASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 Gm38158-201ENSMUST00000194617 339 ntBASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-4Q9EQM3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms