Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC18.95■□□□□ 0.62
Cpsf1Q9EPU4 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf1Q9EPU4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf1Q9EPU4 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf1Q9EPU4 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf1Q9EPU4 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf1Q9EPU4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf1Q9EPU4 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cpsf1Q9EPU4 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf1Q9EPU4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf1Q9EPU4 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf1Q9EPU4 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf1Q9EPU4 Gm13392-201ENSMUST00000117708 150 ntBASIC18.94■□□□□ 0.62
Cpsf1Q9EPU4 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf1Q9EPU4 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf1Q9EPU4 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Cpsf1Q9EPU4 Gm38230-201ENSMUST00000193572 1159 ntBASIC18.94■□□□□ 0.62
Cpsf1Q9EPU4 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf1Q9EPU4 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC18.94■□□□□ 0.62
Cpsf1Q9EPU4 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf1Q9EPU4 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC18.94■□□□□ 0.62
Cpsf1Q9EPU4 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf1Q9EPU4 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC18.94■□□□□ 0.62
Cpsf1Q9EPU4 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf1Q9EPU4 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf1Q9EPU4 Zscan30-202ENSMUST00000224144 1458 ntBASIC18.94■□□□□ 0.62
Cpsf1Q9EPU4 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Cpsf1Q9EPU4 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf1Q9EPU4 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf1Q9EPU4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf1Q9EPU4 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC18.94■□□□□ 0.62
Cpsf1Q9EPU4 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cpsf1Q9EPU4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Cpsf1Q9EPU4 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC18.93■□□□□ 0.62
Cpsf1Q9EPU4 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Cpsf1Q9EPU4 Tmed9-203ENSMUST00000224741 1450 ntBASIC18.93■□□□□ 0.62
Cpsf1Q9EPU4 AC096628.2-201ENSMUST00000225443 1413 ntBASIC18.93■□□□□ 0.62
Cpsf1Q9EPU4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf1Q9EPU4 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf1Q9EPU4 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf1Q9EPU4 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf1Q9EPU4 Gm37424-201ENSMUST00000191727 561 ntBASIC18.93■□□□□ 0.62
Cpsf1Q9EPU4 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf1Q9EPU4 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf1Q9EPU4 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf1Q9EPU4 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf1Q9EPU4 Gm7899-201ENSMUST00000192935 1897 ntBASIC18.93■□□□□ 0.62
Cpsf1Q9EPU4 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf1Q9EPU4 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf1Q9EPU4 Gm11405-201ENSMUST00000118689 1556 ntBASIC18.93■□□□□ 0.62
Cpsf1Q9EPU4 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf1Q9EPU4 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC18.92■□□□□ 0.62
Cpsf1Q9EPU4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Cpsf1Q9EPU4 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf1Q9EPU4 Gm14350-201ENSMUST00000116642 640 ntBASIC18.92■□□□□ 0.62
Cpsf1Q9EPU4 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf1Q9EPU4 Gm12957-201ENSMUST00000117835 377 ntBASIC18.92■□□□□ 0.62
Cpsf1Q9EPU4 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC18.92■□□□□ 0.62
Cpsf1Q9EPU4 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC18.92■□□□□ 0.62
Cpsf1Q9EPU4 AC122459.1-201ENSMUST00000228373 885 ntBASIC18.92■□□□□ 0.62
Cpsf1Q9EPU4 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf1Q9EPU4 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf1Q9EPU4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf1Q9EPU4 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.92■□□□□ 0.62
Cpsf1Q9EPU4 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Cpsf1Q9EPU4 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf1Q9EPU4 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf1Q9EPU4 Gm15544-201ENSMUST00000118776 1531 ntBASIC18.92■□□□□ 0.62
Cpsf1Q9EPU4 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf1Q9EPU4 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf1Q9EPU4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf1Q9EPU4 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Gm24644-201ENSMUST00000157114 139 ntBASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Gm38671-201ENSMUST00000200573 130 ntBASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Gm18630-201ENSMUST00000222109 1397 ntBASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Gm8810-201ENSMUST00000172895 754 ntBASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Gm27514-201ENSMUST00000183692 110 ntBASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Gm44064-201ENSMUST00000204964 1087 ntBASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf1Q9EPU4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms