Protein–RNA interactions for Protein: Q9DBT3

Ccdc97, Coiled-coil domain-containing protein 97, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc97Q9DBT3 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc97Q9DBT3 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc97Q9DBT3 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 Mir6990-201ENSMUST00000183724 91 ntBASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc97Q9DBT3 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms