Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Gm15806-201ENSMUST00000120696 955 ntBASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Gm27701-201ENSMUST00000184498 110 ntBASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Gm28911-201ENSMUST00000188837 117 ntBASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rsph3bQ9DA80 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 Mir7654-201ENSMUST00000185082 70 ntBASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rsph3bQ9DA80 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Rsph3bQ9DA80 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rsph3bQ9DA80 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Rsph3bQ9DA80 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Rsph3bQ9DA80 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 Gm15678-201ENSMUST00000117573 960 ntBASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rsph3bQ9DA80 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms