Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ssmem1Q9D9Y8 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ssmem1Q9D9Y8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ssmem1Q9D9Y8 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ssmem1Q9D9Y8 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Gm7063-201ENSMUST00000186840 981 ntBASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Gm6218-201ENSMUST00000219812 628 ntBASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 AC139580.1-202ENSMUST00000223574 928 ntBASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 AC166997.1-201ENSMUST00000225122 572 ntBASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ssmem1Q9D9Y8 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Gm13385-201ENSMUST00000121089 220 ntBASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Gm42612-201ENSMUST00000197986 623 ntBASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Gm43170-201ENSMUST00000199827 612 ntBASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ssmem1Q9D9Y8 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms