Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Gm10355-201ENSMUST00000097146 517 ntBASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Gm6659-201ENSMUST00000174752 547 ntBASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.05□□□□□ -0.16
Sf3a3Q9D554 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3a3Q9D554 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Gm7284-201ENSMUST00000131667 944 ntBASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3a3Q9D554 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Gm7787-201ENSMUST00000216858 688 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms