Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Zkscan14-203ENSMUST00000198959 2243 ntBASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nip7Q9CXK8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nip7Q9CXK8 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC17.19■□□□□ 0.34
Nip7Q9CXK8 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nip7Q9CXK8 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nip7Q9CXK8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Nip7Q9CXK8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nip7Q9CXK8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nip7Q9CXK8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nip7Q9CXK8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nip7Q9CXK8 Gm12203-201ENSMUST00000118235 598 ntBASIC17.19■□□□□ 0.34
Nip7Q9CXK8 Gm12209-201ENSMUST00000120089 596 ntBASIC17.19■□□□□ 0.34
Nip7Q9CXK8 Gm8584-201ENSMUST00000171982 758 ntBASIC17.19■□□□□ 0.34
Nip7Q9CXK8 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC17.19■□□□□ 0.34
Nip7Q9CXK8 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC17.19■□□□□ 0.34
Nip7Q9CXK8 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nip7Q9CXK8 Gm45880-201ENSMUST00000213041 853 ntBASIC17.19■□□□□ 0.34
Nip7Q9CXK8 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nip7Q9CXK8 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Nip7Q9CXK8 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nip7Q9CXK8 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Nip7Q9CXK8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nip7Q9CXK8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Nip7Q9CXK8 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nip7Q9CXK8 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nip7Q9CXK8 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nip7Q9CXK8 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nip7Q9CXK8 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nip7Q9CXK8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nip7Q9CXK8 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nip7Q9CXK8 Gm10339-203ENSMUST00000225409 1671 ntBASIC17.18■□□□□ 0.34
Nip7Q9CXK8 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nip7Q9CXK8 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC17.18■□□□□ 0.34
Nip7Q9CXK8 Gm6013-201ENSMUST00000212264 699 ntBASIC17.18■□□□□ 0.34
Nip7Q9CXK8 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nip7Q9CXK8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nip7Q9CXK8 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nip7Q9CXK8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nip7Q9CXK8 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nip7Q9CXK8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nip7Q9CXK8 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nip7Q9CXK8 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nip7Q9CXK8 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nip7Q9CXK8 Gm38102-201ENSMUST00000192791 1935 ntBASIC17.17■□□□□ 0.34
Nip7Q9CXK8 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nip7Q9CXK8 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Nip7Q9CXK8 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nip7Q9CXK8 Gm12846-201ENSMUST00000120431 1373 ntBASIC17.17■□□□□ 0.34
Nip7Q9CXK8 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nip7Q9CXK8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nip7Q9CXK8 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC17.17■□□□□ 0.34
Nip7Q9CXK8 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Nip7Q9CXK8 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nip7Q9CXK8 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC17.17■□□□□ 0.34
Nip7Q9CXK8 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nip7Q9CXK8 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nip7Q9CXK8 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nip7Q9CXK8 Gm17870-201ENSMUST00000219489 1174 ntBASIC17.17■□□□□ 0.34
Nip7Q9CXK8 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.17■□□□□ 0.34
Nip7Q9CXK8 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Nip7Q9CXK8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nip7Q9CXK8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Nip7Q9CXK8 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nip7Q9CXK8 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nip7Q9CXK8 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Gm15770-201ENSMUST00000117498 584 ntBASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Gm17330-201ENSMUST00000221047 165 ntBASIC17.16■□□□□ 0.34
Nip7Q9CXK8 AC131997.1-201ENSMUST00000228611 1229 ntBASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nip7Q9CXK8 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms