Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc3Q9CW03 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc3Q9CW03 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc3Q9CW03 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc3Q9CW03 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smc3Q9CW03 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smc3Q9CW03 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Smc3Q9CW03 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smc3Q9CW03 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Smc3Q9CW03 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc3Q9CW03 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC16.32■□□□□ 0.2
Smc3Q9CW03 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc3Q9CW03 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.32■□□□□ 0.2
Smc3Q9CW03 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.32■□□□□ 0.2
Smc3Q9CW03 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smc3Q9CW03 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smc3Q9CW03 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc3Q9CW03 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.32■□□□□ 0.2
Smc3Q9CW03 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc3Q9CW03 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc3Q9CW03 Gm44771-201ENSMUST00000206975 626 ntBASIC16.32■□□□□ 0.2
Smc3Q9CW03 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Smc3Q9CW03 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smc3Q9CW03 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.32■□□□□ 0.2
Smc3Q9CW03 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.32■□□□□ 0.2
Smc3Q9CW03 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc3Q9CW03 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc3Q9CW03 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc3Q9CW03 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc3Q9CW03 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc3Q9CW03 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc3Q9CW03 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc3Q9CW03 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc3Q9CW03 Mir125a-201ENSMUST00000083545 68 ntBASIC16.32■□□□□ 0.2
Smc3Q9CW03 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC16.32■□□□□ 0.2
Smc3Q9CW03 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc3Q9CW03 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc3Q9CW03 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc3Q9CW03 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Smc3Q9CW03 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc3Q9CW03 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smc3Q9CW03 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Smc3Q9CW03 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc3Q9CW03 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Smc3Q9CW03 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc3Q9CW03 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Smc3Q9CW03 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smc3Q9CW03 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC16.31■□□□□ 0.2
Smc3Q9CW03 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.31■□□□□ 0.2
Smc3Q9CW03 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc3Q9CW03 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc3Q9CW03 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc3Q9CW03 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.31■□□□□ 0.2
Smc3Q9CW03 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.31■□□□□ 0.2
Smc3Q9CW03 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.31■□□□□ 0.2
Smc3Q9CW03 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.31■□□□□ 0.2
Smc3Q9CW03 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc3Q9CW03 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc3Q9CW03 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc3Q9CW03 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc3Q9CW03 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc3Q9CW03 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc3Q9CW03 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc3Q9CW03 Gm14752-201ENSMUST00000120719 2075 ntBASIC16.31■□□□□ 0.2
Smc3Q9CW03 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.31■□□□□ 0.2
Smc3Q9CW03 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc3Q9CW03 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Smc3Q9CW03 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC16.31■□□□□ 0.2
Smc3Q9CW03 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc3Q9CW03 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc3Q9CW03 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc3Q9CW03 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Smc3Q9CW03 AC154262.2-201ENSMUST00000224310 2293 ntBASIC16.3■□□□□ 0.2
Smc3Q9CW03 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc3Q9CW03 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc3Q9CW03 Gm43570-201ENSMUST00000199951 3688 ntBASIC16.3■□□□□ 0.2
Smc3Q9CW03 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Smc3Q9CW03 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc3Q9CW03 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smc3Q9CW03 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc3Q9CW03 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc3Q9CW03 Gm4995-201ENSMUST00000117247 432 ntBASIC16.3■□□□□ 0.2
Smc3Q9CW03 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smc3Q9CW03 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.3■□□□□ 0.2
Smc3Q9CW03 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.3■□□□□ 0.2
Smc3Q9CW03 Gm9824-201ENSMUST00000178707 561 ntBASIC16.3■□□□□ 0.2
Smc3Q9CW03 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smc3Q9CW03 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.3■□□□□ 0.2
Smc3Q9CW03 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Smc3Q9CW03 Gm18027-201ENSMUST00000218947 619 ntBASIC16.3■□□□□ 0.2
Smc3Q9CW03 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc3Q9CW03 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc3Q9CW03 Grk6-205ENSMUST00000224653 2976 ntBASIC16.3■□□□□ 0.2
Smc3Q9CW03 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc3Q9CW03 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smc3Q9CW03 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smc3Q9CW03 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc3Q9CW03 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Smc3Q9CW03 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc3Q9CW03 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms