Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Smc1aQ9CU62 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc1aQ9CU62 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc1aQ9CU62 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc1aQ9CU62 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Syt7-204ENSMUST00000223586 1344 ntBASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Gm44855-201ENSMUST00000205725 362 ntBASIC15.55■□□□□ 0.08
Smc1aQ9CU62 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Gm7775-201ENSMUST00000218871 853 ntBASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1aQ9CU62 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Gm43438-201ENSMUST00000198133 379 ntBASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1aQ9CU62 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1aQ9CU62 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1aQ9CU62 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.53■□□□□ 0.08
Smc1aQ9CU62 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1aQ9CU62 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1aQ9CU62 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Smc1aQ9CU62 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.53■□□□□ 0.08
Smc1aQ9CU62 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1aQ9CU62 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1aQ9CU62 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Smc1aQ9CU62 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1aQ9CU62 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1aQ9CU62 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.53■□□□□ 0.08
Smc1aQ9CU62 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1aQ9CU62 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1aQ9CU62 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1aQ9CU62 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1aQ9CU62 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1aQ9CU62 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1aQ9CU62 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1aQ9CU62 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1aQ9CU62 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1aQ9CU62 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smc1aQ9CU62 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms