Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Gm27920-201ENSMUST00000183953 96 ntBASIC13.12□□□□□ -0.31
Ska1Q9CPV1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.12□□□□□ -0.31
Ska1Q9CPV1 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Gm11025-201ENSMUST00000140773 466 ntBASIC13.11□□□□□ -0.31
Ska1Q9CPV1 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ska1Q9CPV1 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.1□□□□□ -0.31
Ska1Q9CPV1 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Gm6973-201ENSMUST00000117080 721 ntBASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Gm15483-201ENSMUST00000120338 456 ntBASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Gm25925-201ENSMUST00000158314 306 ntBASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Gm44771-201ENSMUST00000206975 626 ntBASIC13.1□□□□□ -0.31
Ska1Q9CPV1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms