Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdh23Q99PF4 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Cdh23Q99PF4 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC13.83□□□□□ -0.19
Cdh23Q99PF4 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.83□□□□□ -0.19
Cdh23Q99PF4 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.83□□□□□ -0.19
Cdh23Q99PF4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Cdh23Q99PF4 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdh23Q99PF4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.83□□□□□ -0.2
Cdh23Q99PF4 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Gm23699-201ENSMUST00000158835 135 ntBASIC13.82□□□□□ -0.2
Cdh23Q99PF4 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdh23Q99PF4 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Gm28450-201ENSMUST00000187349 638 ntBASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdh23Q99PF4 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms