Protein–RNA interactions for Protein: Q99JX1

Taf11, Transcription initiation factor TFIID subunit 11, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf11Q99JX1 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Taf11Q99JX1 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Taf11Q99JX1 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Taf11Q99JX1 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.14□□□□□ -0.31
Taf11Q99JX1 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Taf11Q99JX1 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Taf11Q99JX1 Gm13836-201ENSMUST00000121159 501 ntBASIC13.14□□□□□ -0.31
Taf11Q99JX1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Taf11Q99JX1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Taf11Q99JX1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.14□□□□□ -0.31
Taf11Q99JX1 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.14□□□□□ -0.31
Taf11Q99JX1 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Taf11Q99JX1 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Taf11Q99JX1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Taf11Q99JX1 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Taf11Q99JX1 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Taf11Q99JX1 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Taf11Q99JX1 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Taf11Q99JX1 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.14□□□□□ -0.31
Taf11Q99JX1 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Taf11Q99JX1 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Taf11Q99JX1 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Taf11Q99JX1 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Taf11Q99JX1 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Taf11Q99JX1 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Taf11Q99JX1 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Taf11Q99JX1 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Taf11Q99JX1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Taf11Q99JX1 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Taf11Q99JX1 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.12□□□□□ -0.31
Taf11Q99JX1 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Gm8749-201ENSMUST00000117737 331 ntBASIC13.12□□□□□ -0.31
Taf11Q99JX1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.12□□□□□ -0.31
Taf11Q99JX1 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.12□□□□□ -0.31
Taf11Q99JX1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Taf11Q99JX1 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.11□□□□□ -0.31
Taf11Q99JX1 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Taf11Q99JX1 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Taf11Q99JX1 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Taf11Q99JX1 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Taf11Q99JX1 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Taf11Q99JX1 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Taf11Q99JX1 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Taf11Q99JX1 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Taf11Q99JX1 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms