Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.02□□□□□ -0.33
Pcdhac1Q91Y10 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhac1Q91Y10 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Gm6756-201ENSMUST00000180647 1620 ntBASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Gm8396-201ENSMUST00000057361 823 ntBASIC13□□□□□ -0.33
Pcdhac1Q91Y10 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Gm5639-201ENSMUST00000122305 2403 ntBASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdhac1Q91Y10 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhac1Q91Y10 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhac1Q91Y10 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhac1Q91Y10 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhac1Q91Y10 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhac1Q91Y10 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhac1Q91Y10 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhac1Q91Y10 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhac1Q91Y10 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhac1Q91Y10 Gm43474-201ENSMUST00000196415 774 ntBASIC12.99□□□□□ -0.33
Pcdhac1Q91Y10 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.99□□□□□ -0.33
Pcdhac1Q91Y10 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhac1Q91Y10 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhac1Q91Y10 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhac1Q91Y10 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhac1Q91Y10 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhac1Q91Y10 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms