Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Gm27437-201ENSMUST00000183429 107 ntBASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb22Q91XZ8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Gm27772-201ENSMUST00000184900 187 ntBASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Mir6977-201ENSMUST00000184960 64 ntBASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Gm28760-201ENSMUST00000185995 736 ntBASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Gm42612-201ENSMUST00000197986 623 ntBASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Gm43170-201ENSMUST00000199827 612 ntBASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Gm5186-201ENSMUST00000218781 920 ntBASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb22Q91XZ8 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdhb22Q91XZ8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb22Q91XZ8 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb22Q91XZ8 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb22Q91XZ8 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb22Q91XZ8 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb22Q91XZ8 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb22Q91XZ8 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb22Q91XZ8 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdhb22Q91XZ8 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb22Q91XZ8 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb22Q91XZ8 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.17■□□□□ 0.18
Pcdhb22Q91XZ8 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb22Q91XZ8 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb22Q91XZ8 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.17■□□□□ 0.18
Pcdhb22Q91XZ8 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb22Q91XZ8 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdhb22Q91XZ8 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.17■□□□□ 0.18
Pcdhb22Q91XZ8 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdhb22Q91XZ8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb22Q91XZ8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb22Q91XZ8 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb22Q91XZ8 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhb22Q91XZ8 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms