Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Gm13015-201ENSMUST00000118674 204 ntBASIC12.42□□□□□ -0.42
Pcdhga3Q91XY5 Gm12882-201ENSMUST00000121696 517 ntBASIC12.42□□□□□ -0.42
Pcdhga3Q91XY5 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga3Q91XY5 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga3Q91XY5 Gm26308-201ENSMUST00000157768 69 ntBASIC12.42□□□□□ -0.42
Pcdhga3Q91XY5 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.42□□□□□ -0.42
Pcdhga3Q91XY5 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga3Q91XY5 Gm5312-201ENSMUST00000203728 547 ntBASIC12.42□□□□□ -0.42
Pcdhga3Q91XY5 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhga3Q91XY5 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhga3Q91XY5 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.42□□□□□ -0.42
Pcdhga3Q91XY5 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Pcdhga3Q91XY5 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga3Q91XY5 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhga3Q91XY5 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga3Q91XY5 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga3Q91XY5 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga3Q91XY5 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.42□□□□□ -0.42
Pcdhga3Q91XY5 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga3Q91XY5 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga3Q91XY5 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga3Q91XY5 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga3Q91XY5 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Gm23935-201ENSMUST00000102303 57 ntBASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Gm24270-201ENSMUST00000102326 57 ntBASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Gm24245-201ENSMUST00000157318 57 ntBASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Gm10253-201ENSMUST00000194270 940 ntBASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga3Q91XY5 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Gm6222-201ENSMUST00000120787 396 ntBASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Gm8396-201ENSMUST00000057361 823 ntBASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhga3Q91XY5 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Pcdhga3Q91XY5 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Pcdhga3Q91XY5 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.4□□□□□ -0.43
Pcdhga3Q91XY5 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Pcdhga3Q91XY5 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga3Q91XY5 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms