Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim60Q8VI40 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Gm14494-201ENSMUST00000118786 435 ntBASIC14.36□□□□□ -0.11
Trim60Q8VI40 Mir1895-201ENSMUST00000122615 79 ntBASIC14.36□□□□□ -0.11
Trim60Q8VI40 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.36□□□□□ -0.11
Trim60Q8VI40 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Gm27494-201ENSMUST00000184735 189 ntBASIC14.36□□□□□ -0.11
Trim60Q8VI40 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.36□□□□□ -0.11
Trim60Q8VI40 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.36□□□□□ -0.11
Trim60Q8VI40 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Gm10175-201ENSMUST00000086013 645 ntBASIC14.36□□□□□ -0.11
Trim60Q8VI40 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Gm9824-201ENSMUST00000178707 561 ntBASIC14.35□□□□□ -0.11
Trim60Q8VI40 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.35□□□□□ -0.11
Trim60Q8VI40 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.35□□□□□ -0.11
Trim60Q8VI40 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Mir125a-201ENSMUST00000083545 68 ntBASIC14.35□□□□□ -0.11
Trim60Q8VI40 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.35□□□□□ -0.11
Trim60Q8VI40 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim60Q8VI40 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trim60Q8VI40 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.34□□□□□ -0.11
Trim60Q8VI40 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.34□□□□□ -0.11
Trim60Q8VI40 Gm11779-201ENSMUST00000118541 368 ntBASIC14.34□□□□□ -0.11
Trim60Q8VI40 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Gm27631-201ENSMUST00000184163 466 ntBASIC14.34□□□□□ -0.11
Trim60Q8VI40 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms