Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Rnf17-202ENSMUST00000223627 2077 ntBASIC16.69■□□□□ 0.26
Ccdc9Q8VC31 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc9Q8VC31 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc9Q8VC31 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc9Q8VC31 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc9Q8VC31 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Gm15372-201ENSMUST00000120729 834 ntBASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc9Q8VC31 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC16.67■□□□□ 0.26
Ccdc9Q8VC31 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Ccdc9Q8VC31 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc9Q8VC31 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc9Q8VC31 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc9Q8VC31 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc9Q8VC31 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.67■□□□□ 0.26
Ccdc9Q8VC31 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc9Q8VC31 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.67■□□□□ 0.26
Ccdc9Q8VC31 Gm43767-201ENSMUST00000198933 381 ntBASIC16.67■□□□□ 0.26
Ccdc9Q8VC31 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc9Q8VC31 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc9Q8VC31 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc9Q8VC31 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc9Q8VC31 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Ccdc9Q8VC31 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc9Q8VC31 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc9Q8VC31 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc9Q8VC31 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc9Q8VC31 CT025624.1-201ENSMUST00000224007 2700 ntBASIC16.67■□□□□ 0.26
Ccdc9Q8VC31 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc9Q8VC31 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc9Q8VC31 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc9Q8VC31 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc9Q8VC31 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Gm5385-201ENSMUST00000118988 1559 ntBASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Matn2-203ENSMUST00000226766 3252 ntBASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Ccdc9Q8VC31 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc9Q8VC31 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc9Q8VC31 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc9Q8VC31 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ccdc9Q8VC31 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc9Q8VC31 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc9Q8VC31 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc9Q8VC31 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms