Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Top1mtQ8R4U6 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.6■□□□□ 0.25
Top1mtQ8R4U6 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Top1mtQ8R4U6 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Top1mtQ8R4U6 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Top1mtQ8R4U6 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Top1mtQ8R4U6 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Top1mtQ8R4U6 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Top1mtQ8R4U6 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Top1mtQ8R4U6 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Top1mtQ8R4U6 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Top1mtQ8R4U6 Gm12585-201ENSMUST00000117307 290 ntBASIC16.6■□□□□ 0.25
Top1mtQ8R4U6 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Top1mtQ8R4U6 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Top1mtQ8R4U6 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Top1mtQ8R4U6 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Top1mtQ8R4U6 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Top1mtQ8R4U6 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Top1mtQ8R4U6 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Top1mtQ8R4U6 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.6■□□□□ 0.25
Top1mtQ8R4U6 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Top1mtQ8R4U6 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Top1mtQ8R4U6 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC16.6■□□□□ 0.25
Top1mtQ8R4U6 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Top1mtQ8R4U6 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Top1mtQ8R4U6 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Top1mtQ8R4U6 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Mir698-201ENSMUST00000102164 109 ntBASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Gm4804-201ENSMUST00000182234 999 ntBASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Gm10766-202ENSMUST00000194123 606 ntBASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top1mtQ8R4U6 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Top1mtQ8R4U6 Gm2420-202ENSMUST00000202224 2249 ntBASIC16.58■□□□□ 0.25
Top1mtQ8R4U6 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Top1mtQ8R4U6 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Top1mtQ8R4U6 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Top1mtQ8R4U6 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Top1mtQ8R4U6 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Top1mtQ8R4U6 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC16.58■□□□□ 0.24
Top1mtQ8R4U6 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.58■□□□□ 0.24
Top1mtQ8R4U6 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Top1mtQ8R4U6 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms