Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd109Q8R422 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cd109Q8R422 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Cd109Q8R422 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd109Q8R422 Gm13123-201ENSMUST00000122173 492 ntBASIC19.49■□□□□ 0.71
Cd109Q8R422 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC19.49■□□□□ 0.71
Cd109Q8R422 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cd109Q8R422 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Cd109Q8R422 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd109Q8R422 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
Cd109Q8R422 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd109Q8R422 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd109Q8R422 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cd109Q8R422 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd109Q8R422 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cd109Q8R422 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Cd109Q8R422 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC19.48■□□□□ 0.71
Cd109Q8R422 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Cd109Q8R422 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd109Q8R422 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cd109Q8R422 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd109Q8R422 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd109Q8R422 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cd109Q8R422 Mir8109-201ENSMUST00000184375 117 ntBASIC19.48■□□□□ 0.71
Cd109Q8R422 Gm6013-201ENSMUST00000212264 699 ntBASIC19.48■□□□□ 0.71
Cd109Q8R422 Gm19309-201ENSMUST00000218295 205 ntBASIC19.48■□□□□ 0.71
Cd109Q8R422 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd109Q8R422 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cd109Q8R422 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cd109Q8R422 Abhd6-203ENSMUST00000225234 1958 ntBASIC19.48■□□□□ 0.71
Cd109Q8R422 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd109Q8R422 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd109Q8R422 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd109Q8R422 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd109Q8R422 Gm5620-201ENSMUST00000077991 1348 ntBASIC19.48■□□□□ 0.71
Cd109Q8R422 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd109Q8R422 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd109Q8R422 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC19.47■□□□□ 0.71
Cd109Q8R422 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd109Q8R422 Gm12846-201ENSMUST00000120431 1373 ntBASIC19.47■□□□□ 0.71
Cd109Q8R422 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd109Q8R422 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd109Q8R422 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd109Q8R422 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cd109Q8R422 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC19.47■□□□□ 0.71
Cd109Q8R422 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cd109Q8R422 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd109Q8R422 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Cd109Q8R422 Gm2824-203ENSMUST00000226189 1228 ntBASIC19.47■□□□□ 0.71
Cd109Q8R422 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd109Q8R422 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cd109Q8R422 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd109Q8R422 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC19.47■□□□□ 0.71
Cd109Q8R422 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd109Q8R422 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd109Q8R422 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd109Q8R422 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Cd109Q8R422 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd109Q8R422 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd109Q8R422 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cd109Q8R422 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC19.46■□□□□ 0.71
Cd109Q8R422 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd109Q8R422 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Cd109Q8R422 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC19.46■□□□□ 0.71
Cd109Q8R422 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd109Q8R422 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Cd109Q8R422 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd109Q8R422 Mir686-201ENSMUST00000102174 109 ntBASIC19.46■□□□□ 0.71
Cd109Q8R422 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd109Q8R422 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cd109Q8R422 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC19.46■□□□□ 0.71
Cd109Q8R422 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC19.46■□□□□ 0.71
Cd109Q8R422 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC19.46■□□□□ 0.71
Cd109Q8R422 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Cd109Q8R422 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC19.46■□□□□ 0.71
Cd109Q8R422 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC19.46■□□□□ 0.71
Cd109Q8R422 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cd109Q8R422 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd109Q8R422 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cd109Q8R422 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cd109Q8R422 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Cd109Q8R422 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cd109Q8R422 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cd109Q8R422 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd109Q8R422 Gm8706-201ENSMUST00000197372 1491 ntBASIC19.46■□□□□ 0.71
Cd109Q8R422 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC19.46■□□□□ 0.71
Cd109Q8R422 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd109Q8R422 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd109Q8R422 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Cd109Q8R422 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd109Q8R422 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cd109Q8R422 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC19.45■□□□□ 0.7
Cd109Q8R422 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd109Q8R422 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd109Q8R422 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cd109Q8R422 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC19.45■□□□□ 0.7
Cd109Q8R422 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cd109Q8R422 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd109Q8R422 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC19.45■□□□□ 0.7
Cd109Q8R422 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms